Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00070 ATGTCGATGCTGCTGAGGAAGGCTTGGGAAATGGTGTTGTGGAGATCTGATTCATCAACGTCAGCATCAGCATCATCATCAACAACAACTACAACAAGATTTTCACTGGAAGTGGCACGTTCTGACATGGGTGAATTGGAGCAGCTACCCAGTGACATCTTGATGCAAATTCTGAAGCTTTTGGGTCCAAAAGCGGTTGCAAAATTGAGTGTGGTTTGCAAGAGTTTGAGATCCATTGTCTCTGATAACAGACTTTGGATTTACTTCATTCAGACCCATCAGGCTGAACCTTCTGGGGATTCTGTGTTCTTTGCTGAGACCACCTTGAGCTCTGGCTACCCTCTTCCAGCTTACGTTGGTCACTGGCCCCAGCTATCATTCAAGCATATTTATGGCCAGAGAGCACAAGTTCCTGGTTCTATTATTATTGATGGTGGTTCTGGCTACTGCAAATTTGGCTGGAGCAAATACGAATGCCCATCTGGTCGATCAGCAACATTTTTGGAGTTTGGCAACATTGAGTCTCCAATGTATACTAGGCTTCGACATTTTTTTGCAACTATTTATAACAGGATGCAGGTGAAACCAAATAAACAACCAGTTATTGTTTCAGTACCAATATGTCATTATGAAGATACTCAATCAGCAAAAGCTTCAAGACGACAGCTTAAAGATGCAATCTACGCCTCCTTGTTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAACCAGGCCACTCTAGCTCTGTACGCTGCAAAACGAACTTCTGGAATAGTTGTTAATATAGGTTTTCAAGTCACTTCTATAGTTCCAATTTTAAATGGTAAAGTAATGCGCAAGGTGGGTGTGGAAGTTGTGGGGCTGGGAGCACTGAAACTTACCGGATTTCTCAGGGAGAAGATGCAATTGAACAACTTAACTTTTCAGTCTTTGTACACTGTTCGCACACTGAAAGAGAAGCTATGCTATGTTGCACATGATTATGAAGCTGAGCTATCAAAAGATACAAAAGCATCATATGAAGCTGCAGGAGAAGGATGGTTTACCCTCTCAAAAGAGAGGTTTCAGACACCAGAGATCTTATTCCAGCCTCATTTTGCTGGAGTGCAAGCCATGGGTCTGCACCAAGCAATAGCACTTTGTGTGGAGCATTGCCATTCTGCAGATTTACCAGGTGACAACGATTGGTACAAGACTATAGTTTTATCAGGGGGAACTGCATGCCTACCTGGTTTGGCAGAAAGGGTAGAGAAGGAACTCCATGCCTTACTTCCTCCCTACATGTTCAAAGGAATTAGAGTCATTCCTCCTCCATATGGTGCTGATACACCATGGTTTGGAGCTAAGATTATTAGCAATTTGAGCACCTTTCCTGGTCATTGGTGTGTCACAAAAAAGCAGTTCCGTCAGAAGCCTAGACTCAGCCTCATATGGTGA 1437 0.4328 MSMLLRKAWEMVLWRSDSSTSASASSSTTTTTRFSLEVARSDMGELEQLPSDILMQILKLLGPKAVAKLSVVCKSLRSIVSDNRLWIYFIQTHQAEPSGDSVFFAETTLSSGYPLPAYVGHWPQLSFKHIYGQRAQVPGSIIIDGGSGYCKFGWSKYECPSGRSATFLEFGNIESPMYTRLRHFFATIYNRMQVKPNKQPVIVSVPICHYEDTQSAKASRRQLKDAIYASLFDMNVPAVCAVNQATLALYAAKRTSGIVVNIGFQVTSIVPILNGKVMRKVGVEVVGLGALKLTGFLREKMQLNNLTFQSLYTVRTLKEKLCYVAHDYEAELSKDTKASYEAAGEGWFTLSKERFQTPEILFQPHFAGVQAMGLHQAIALCVEHCHSADLPGDNDWYKTIVLSGGTACLPGLAERVEKELHALLPPYMFKGIRVIPPPYGADTPWFGAKIISNLSTFPGHWCVTKKQFRQKPRLSLIW* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00070 478 Gene3D - 184 470 - -
Phac5g00070 478 Pfam Actin 187 469 IPR004000 -
Phac5g00070 478 Gene3D Actin; Chain A, domain 4 288 371 - -
Phac5g00070 478 CDD NBD_sugar-kinase_HSP70_actin 141 285 - -
Phac5g00070 478 ProSiteProfiles F-box domain profile. 43 89 IPR001810 GO:0005515
Phac5g00070 478 Pfam F-box domain 47 87 IPR001810 GO:0005515
Phac5g00070 478 PANTHER ACTIN 181 470 IPR004000 -
Phac5g00070 478 SUPERFAMILY Actin-like ATPase domain 140 260 IPR043129 -
Phac5g00070 478 Gene3D - 36 135 - -
Phac5g00070 478 SMART actin_3 138 468 IPR004000 -
Phac5g00070 478 SMART fbox_2 49 89 IPR001810 GO:0005515
Phac5g00070 478 SUPERFAMILY Actin-like ATPase domain 254 469 IPR043129 -
Phac5g00070 478 Gene3D - 245 443 - -
Phac5g00070 478 SUPERFAMILY F-box domain 41 97 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00070 Phac-Chr5 653424 661494 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00070 187 470 Cytoskeleton Gene Families AT3G12110 34.247 6.08e-45 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00070 K16616 - gmx:100791973 848.195