Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00056 ATGGAATCTCAATTAGTAGACAGAAATGATGCCATGGAAGTTTCTGGGGATGTGGATTTAAGTACATATGAAGTTCAGGTACATGAAGAAACATATAAAGTGGATCCAAATGAGGGGTGTAGAGTACTAGAGAGTTCTTCTGGGGGAGAGTTGGGTATCTGTGATGATGATCATGCTATTCAGGAACCATATGAAGGCTTGGAGTTTGAATCTGAAGATGCTGCTAAGATATTCTATGATGAATATGCCCGACGTGTAGGATTTGTCATGCGTGTGATGTCGTGCAGACGCTCAGAAAGGGATGGTAGGATTCTCGCCCGCCGGCTTGGGTGCAATAAAGAGGGTTACTGCGTCAGCATCCGAGGGAAATTTTCATCGGTTCGGAAACCTAGGGCCAGCACAAGGGAAGGGTGTAAGGCAATGATTCACATCAAATATGAGAAATCTGGAAAATGGGTGATAACAAAGTTTGTGAAGGATCATAATCATCCATTAGTAGTCTCTCCACGCGAAGCCCGCCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAATTAACAGCAGAACTTCGGCATAAAAAACGGTTGTGTGCAACATATCAAGAACAGCTGACTTCCTTTATGAAGGTTGTTGAAGAGCACAATGAGAAGCTATCTACGAAAATTCATCATGTAGTTAATAATCTCAAAGAATTTGAATCCATAGACGAGCTTTTGCACCAAACATAG 729 0.4184 MESQLVDRNDAMEVSGDVDLSTYEVQVHEETYKVDPNEGCRVLESSSGGELGICDDDHAIQEPYEGLEFESEDAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFSSVRKPRASTREGCKAMIHIKYEKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTAELRHKKRLCATYQEQLTSFMKVVEEHNEKLSTKIHHVVNNLKEFESIDELLHQT* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00056 242 Pfam FAR1 DNA-binding domain 78 166 IPR004330 -
Phac5g00056 242 Coils Coil 176 203 - -
Phac5g00056 242 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00056 Phac-Chr5 587917 591644 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Phac5g00056 FAR1 4.1e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00056 - - pvu:PHAVU_005G002900g 488.034