Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00027 ATGGAGTCTGCTCCTCCTTCCAACGATCTGTGTTCAGTGTGTCATGGCAACTTTCACATTCCCTGCCAAGCCAATTGCTCTCACTGGTTTTGTGCAAATTGCATCATGCTGGTGTGGCAGCACGGATCAGGGACAAGCTCTTGCAAATGCCCTCTTTGTCGGCGACCCATCACTCTCTTAGTCCCCACCGAACACTCTCTCAGGCAGCGTCACGACCCTGAAGTTGCTCAGATTCTCTCCAAAATTCATGCTTACAACCGTGTCTTCGGTGGCCAACCCTCCTCTTTTTTCCAGAGACTGCAAGATCTTCCTTTTCTGCTGCACAGGCTCTTGCGGGAGTTCCTCGACCCTCACAGATCCCTTCCTCTTGTCATCCGTGCCCGTGTCTTCATTGCTATGATAGCAAGTTTTGTATACATCCTCAGCCCAATTGACTTCATTCCTGAAGGAATATTAGGAATAGTTGGTCTCTTAGATGATGTCTTAATTGGGCTCATTTGCTTCCTACATGTTGCTGCCCTCTATAGATCAGTTCTCTACCTCCGTCATGGAGGTTCCTGA 561 0.4884 MESAPPSNDLCSVCHGNFHIPCQANCSHWFCANCIMLVWQHGSGTSSCKCPLCRRPITLLVPTEHSLRQRHDPEVAQILSKIHAYNRVFGGQPSSFFQRLQDLPFLLHRLLREFLDPHRSLPLVIRARVFIAMIASFVYILSPIDFIPEGILGIVGLLDDVLIGLICFLHVAALYRSVLYLRHGGS* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00027 186 Pfam Protein of unknown function (DUF1232) 131 163 IPR010652 -
Phac5g00027 186 SMART ring_2 11 53 IPR001841 -
Phac5g00027 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 91 IPR013083 -
Phac5g00027 186 ProSiteProfiles Zinc finger RING-type profile. 11 54 IPR001841 -
Phac5g00027 186 PANTHER UNCHARACTERIZED 3 183 IPR038896 GO:0061630
Phac5g00027 186 SUPERFAMILY RING/U-box 7 62 - -
Phac5g00027 186 ProSitePatterns Zinc finger RING-type signature. 26 35 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00027 Phac-Chr5 344614 347164 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00027 36 186 C3H Transcription Factor Family AT1G72175 70.199 1.10e-64 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00027 K15707 - gmx:100306204 335.109