Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00011 ATGAAAAACATAAGATCAACAATTGAGAGGTACAAAAAGGCATGTTCAGATCATTCAAGTACCAGCACTACCACCGAAATCAATGCTCAGTATTATCAACAAGAATCTGCAAAGCTGAGACAGCAAATACAGATGCTGCAGAATTCAAACAGGCACCTAATGGGTGATGCTTTAAGCACATTGACTGTGAAGGAACTTAAGCAGTTGGAGAATAGACTTGAAAGAGGAATCACTAGAATCAGATCTAAGAAACATGAGATGCTACTGGCAGAAATTGAATACTTCCAGAAAAGGGAAATTGAACTGGAAAATGAAAATCTTTGCCTTCGAACTAAGATAACTGACGTTGAGAGGATTCAGCAAGTAAACATGGTTTCTGGACCAGAGCTGAATGCCATTCAGGCATTAGCTTCTCGTAACTTCTTCAATCCAAACATGATGGAGGGTGGATCTGTTTACCCTCAGTCAGATAAGAAGATTCTTCATCTTGGGTGA 495 0.3939 MKNIRSTIERYKKACSDHSSTSTTTEINAQYYQQESAKLRQQIQMLQNSNRHLMGDALSTLTVKELKQLENRLERGITRIRSKKHEMLLAEIEYFQKREIELENENLCLRTKITDVERIQQVNMVSGPELNAIQALASRNFFNPNMMEGGSVYPQSDKKILHLG* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00011 164 Coils Coil 66 86 - -
Phac5g00011 164 Coils Coil 29 49 - -
Phac5g00011 164 ProSiteProfiles K-box domain profile. 29 119 IPR002487 GO:0003700|GO:0005634|GO:0006355
Phac5g00011 164 Pfam K-box region 26 113 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00011 Phac-Chr5 292829 295522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00011 3 164 MADS-box Gene Family AT4G09960 69.412 3.15e-75 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00011 K09264 - gmx:100301905 312.768