Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02366 ATGGCACTCCCCACTTCTTTGACTCCATGGCCATTTACATTTCTCCTATCATCATCATTGTTATTCTTATCGCACATTCTCCTCATCGTCACTGCTTCTTCAGACAAAGAATTGCTCCTCAAATTCAAAAGCTCCATTGAAAACAACCATTTATTGTCTTTGTGGAATGAATCTGTGCATCCATGTTCAGGTCAAGCACCTAACTGGCCTTACGTTCAGTGTTACAAGGGACATGTGTGGGGGTTGACGCTGGAAAACATGGGCCTCAAAGGGGTCCTTGATGTCCAAGCCCTGGAGGAGTTACCCTTTCTCCGAACCCTAAGCCTCATGAACAATGATTTTGACACTGAATGGCCTGACATGAACGATATACTGGGTTTGAAGACCCTTTATCTTTCAAATAACAAGTTTTATGGAGAGGTTCCTGCTCAGGCTTTTCAGGGCATGAAATGGTTGAAGAAAATCCATTTGTCCCACAACCAGTTTACAGGTCTTATTCCAACTTCCCTCACCAACATGCCTAGGCTTGTGGAGTTGAGGCTCAATGCAAACAACTTCTCCGGCTCCATACCAGATTTTCCTCGTTCATTGCAATCTTTTAGTGTAGCCGATAATCAATTAGAGGGAGAAATACCAAACGGACTCCGTGACATGCCCGTTTCAGCTTTCTCTGGTAATGAAGGGCTATGTGGAGCACCGTTAGGAGCATGCTCCTCCAAAAAGAAATCACCTCTGAGTATCATTGTGGCTGTGGTTCTTGTTATTGTAGCACTGGTTGTTATTGGAGCGGTAGTATTGTTTGTCCTTCGTCGGAGAAGGGAGCAGGAGCCAGATATGTCTGCGGAAAATCCATCACCAATGTCCCACAAGAAAGAAAGAAGTAGGGAACCATCAGATGAAGGAAGTCACAGGTCCCAAGCCTCGAGCCGCAGCAGTGGAAGAGACAACACGAGGTTATCGTTTGTGAGGGATTACAGAGATCAGTTTGATTTGCATGAACTACTCAGAGCCTCAGCTGAGATACTGGGCAGTGGCTATTACAGCTCTTCCTACAAGGCTTCTCTGTTAAATGGAGCAGTGATGGTGGTGAAGAGATTCAAGAAAATGAACAATTTGGGGAAGGAAGAGTTTCAGGAGCACATGCGACGCATTGGACGGTTAAATCATCCTAATCTGCTTCCTCTCGTTGCCTACTACTACAGAAAGGAGGAGAAACTCTTCGTTACTGACTTTGTTCACAATGGCAGCTTGGCTATTCGCCTCCACGGATACGAAGCTCTAGGGCAACCAAGCTTGGACTGGGCAAGTAGGCTGAAGATAGTGAAAGGAATAGCAAAAGGACTTGAATATCTTTACTCGGAGATGCCAAGGTTAATTGCACCCCATGGACATCTAAAGTCCTCCAACGTTCTTCTGAATGAATCTTTGGAGGCCATTCTGACGGACTATGGGTTGGTACCAGTGATAAACCAAGACCTTGCTCCTAACATCAATGTGATCTATAAGTCCCCAGAGTATTTGCAGCATGGTCGCATTACAAAGAAGACTGATGTGTGGTGTCTTGGGATACTTATTTTGGAGATTCTAACGGGAAACCTTCCTGCTAACTTTCTACAAGGGAAAGGAAGTGAGTTGAGTTTGATAAACTGGGTCCATTCTGTTGCCTCAGAAAGTACTGATGAGGTGTTTGATAAGAACATGGAGGTAACAAGAAACAGTGAGGGGGAGATGATAAAGCTTTTGAAGATTGCATTGGCTTGTTGTGAATGGGATGTGGACAAGAGATGGGACCTTCAAGAAGTTGTGGATAAAATTCATCAAGTTAAGGAAAGAGATAATGAGGATGATAATCCTTCTTCTAATGCTAGTGAAGTTGATATGAAGCAGAGTGAGTCAGGTGAAGCTAGTTTCTCCATAGATGGTTGA 1926 0.4424 MALPTSLTPWPFTFLLSSSLLFLSHILLIVTASSDKELLLKFKSSIENNHLLSLWNESVHPCSGQAPNWPYVQCYKGHVWGLTLENMGLKGVLDVQALEELPFLRTLSLMNNDFDTEWPDMNDILGLKTLYLSNNKFYGEVPAQAFQGMKWLKKIHLSHNQFTGLIPTSLTNMPRLVELRLNANNFSGSIPDFPRSLQSFSVADNQLEGEIPNGLRDMPVSAFSGNEGLCGAPLGACSSKKKSPLSIIVAVVLVIVALVVIGAVVLFVLRRRREQEPDMSAENPSPMSHKKERSREPSDEGSHRSQASSRSSGRDNTRLSFVRDYRDQFDLHELLRASAEILGSGYYSSSYKASLLNGAVMVVKRFKKMNNLGKEEFQEHMRRIGRLNHPNLLPLVAYYYRKEEKLFVTDFVHNGSLAIRLHGYEALGQPSLDWASRLKIVKGIAKGLEYLYSEMPRLIAPHGHLKSSNVLLNESLEAILTDYGLVPVINQDLAPNINVIYKSPEYLQHGRITKKTDVWCLGILILEILTGNLPANFLQGKGSELSLINWVHSVASESTDEVFDKNMEVTRNSEGEMIKLLKIALACCEWDVDKRWDLQEVVDKIHQVKERDNEDDNPSSNASEVDMKQSESGEASFSIDG* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02366 641 Gene3D Phosphorylase Kinase; domain 1 302 411 - -
Phac4g02366 641 MobiDBLite consensus disorder prediction 620 641 - -
Phac4g02366 641 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 95 190 - -
Phac4g02366 641 MobiDBLite consensus disorder prediction 609 641 - -
Phac4g02366 641 Pfam Leucine rich repeat 127 186 IPR001611 GO:0005515
Phac4g02366 641 Pfam Protein kinase domain 339 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02366 641 MobiDBLite consensus disorder prediction 275 303 - -
Phac4g02366 641 ProSiteProfiles Protein kinase domain profile. 336 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02366 641 SUPERFAMILY L domain-like 59 219 - -
Phac4g02366 641 FunFam pollen receptor-like kinase 1 305 411 - -
Phac4g02366 641 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 22 614 IPR046959 -
Phac4g02366 641 Gene3D Ribonuclease Inhibitor 27 121 IPR032675 -
Phac4g02366 641 Gene3D Ribonuclease Inhibitor 122 244 IPR032675 -
Phac4g02366 641 Gene3D Transferase(Phosphotransferase) domain 1 412 633 - -
Phac4g02366 641 Pfam Leucine rich repeat N-terminal domain 33 74 IPR013210 -
Phac4g02366 641 MobiDBLite consensus disorder prediction 275 316 - -
Phac4g02366 641 SUPERFAMILY Protein kinase-like (PK-like) 340 606 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02366 Phac-Chr4 49752370 49756699 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02366 34 639 Receptor kinase-like Gene Family AT5G35390 49.062 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac4g02366 Pkinase 4.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02366 - - gmx:100785189 810.061