Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02329 ATGTGGTGTGAACCTTTCAACTGTTCATGTTACGAACTGCTTTTGCTTTGGTTTCAGATTCTGATTGGCCCTTCTGATTGGGAAGATCATTCCAAAGGAAAGGAAGGGTGTGCAAGATACAGGATTCATAACCTCCCTCAGGAATCGAATCCAGGGGTGTATGAGCTTGGAATTGCGGTGGCCGGTGGTGGTTTGGGGCGTCAAATTTCCAAGCTTGCCCCTCACCCTGATCGCATTGTGGTGGTTTACCTTGGACAAGCTGACAATGTGAGAACAAGACTCCAGTGTTATGGCAGAACAGGAGCTCACTTGGAAAGTGCCATTTCAGATGATTCTTCTCTCCAAAAGGGTCTTCCCTTGTTTCAGGAAGTGTTTTCACAAGGATTCTCAATCGTTTATCGATGGGCTCCGACTCGAAACAAGGAAGATGCCCTGCGAACAGAAGATCAGCTTCTCAGAACATTTGATTATGCATGGAACACAAGCAATAATGGTATCCGGAGGCCTGAAGAAATTCTTCAAAAGCTTCAAAAAATTGCTTCAGGCACCAGAACACTTTCAGATGTGGCCAAAGTGCTACTACCATTCACTCAGAAGCAAGTGGGCATCCGAATTAAATCGTGCAAGCTACCTCAGGAAGATGACAATGGCAGCTATAATTTCCTAACTCGAGTATTCAGTTTTAACAGATCACGTCCTAGGATAGTTCAAAGTACCACTGGTGTTGTTCAGGAACAGGAGAATGCTAAAATTTGTGGAGTTTCATTGGGTGATGGTTTAATTTGTAGAAGGCCACCAGCTGAGAAAAGATTGAGGTGTCCTGAACACAAAGGAATGAGAGCTAATGTTTCCATTGCCAAAGCAATCAGTGTAGCCAAGTCAGAGAGCAATGTTTCACAAACAGTGGTTGGGAGTCCTGTTGATGAAAGCCTGACAAACACCAATATATGTGGAATCATCTTAAATGATGGCTCCACCTGCAGAAGGCAACCAGTTGAAGGAAGGAAAAGGTGTCATGAGCACAAAGGGAGGAGAATTGGTGCATCTGTTCAAAAAAGGGGCAACGGATACAGATACCAAAATGTTAGCCATGGTGTAGAAGATTCCCTACAAACACTGGTAGGGAGTCCTGTTGATGAGAGTATCTCAAACACAATTTGTGGAATCATCTTAAATGATGGCTCTGCCTGTACAAGACAACCAGTTAAAGGAAGAAAAAGGTGCCATGAGCACAAAGGGAGAAGAACTCGTGCATCTTTTCATGTAAATCAGAAATAA 1278 0.4366 MWCEPFNCSCYELLLLWFQILIGPSDWEDHSKGKEGCARYRIHNLPQESNPGVYELGIAVAGGGLGRQISKLAPHPDRIVVVYLGQADNVRTRLQCYGRTGAHLESAISDDSSLQKGLPLFQEVFSQGFSIVYRWAPTRNKEDALRTEDQLLRTFDYAWNTSNNGIRRPEEILQKLQKIASGTRTLSDVAKVLLPFTQKQVGIRIKSCKLPQEDDNGSYNFLTRVFSFNRSRPRIVQSTTGVVQEQENAKICGVSLGDGLICRRPPAEKRLRCPEHKGMRANVSIAKAISVAKSESNVSQTVVGSPVDESLTNTNICGIILNDGSTCRRQPVEGRKRCHEHKGRRIGASVQKRGNGYRYQNVSHGVEDSLQTLVGSPVDESISNTICGIILNDGSACTRQPVKGRKRCHEHKGRRTRASFHVNQK* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02329 425 Pfam GIY-YIG domain-containing protein 18 173 - -
Phac4g02329 425 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 301 360 IPR038909 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02329 Phac-Chr4 49456535 49458379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02329 4 415 HRT Transcription Factor Family AT5G56780 36.998 3.44e-88 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Phac4g02329 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02329 - - gmx:100784450 559.296