Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02328 ATGGCGGCGGTGGCCGTCACAAGGTTGAAGAGGGAACAATGCAACCGCACAAAGCACGATTCCAGCTTCTCCCATTGGAAGATTCTGATTGGCCCTTCTGATTGGGAAGATCATTCCAAAGGAAAGGAAGGGTGTGCAAGATACAGGATTCATAACCTCCCTCAGGAATCGAATCCAGGGGTGTATGAGCTTGGAATTGCGGTGGCCGGTGGTGGTTTGGGGCGTCAAATTTCCAAGCTTGCCCCTCACCCTGATCGCATTGTGGTGGTTTACCTTGGACAAGCTGACAATGTGAGAACAAGACTCCAGTGTTATGGCAGAACAGGAGCTCACTTGGAAAGTGCCATTTCAGATGATTCTTCTCTCCAAAAGGGTCTTCCCTTGTTTCAGGAAGTGTTTTCACAAGGATTCTCAATCGTTTATCGATGGGCTCCGACTCGAAACAAGGAAGATGCCCTGCGAACAGAAGATCAGCTTCTCAGAACATTTGATTATGCATGGAACACAAGCAATAATGGTATCCGGAGGCCTGAAGAAATTCTTCAAAAGCTTCAAAAAATTGCTTCAGGCACCAGAACACTTTCAGATGTGGCCAAAGTGCTACTACCATTCACTCAGAAGCAAGTGGGCATCCGAATTAAATCGTGCAAGCTACCTCAGGAAGATGACAATGGCAGCTATAATTTCCTAACTCGAGTATTCAGTTTTAACAGATCACGTCCTAGGATAGTTCAAAGTACCACTGGTGTTGTTCAGGAACAGGAGAATGCTAAAATTTGTGGAGTTTCATTGGGTGATGGTTTAATTTGTAGAAGGCCACCAGCTGAGAAAAGATTGAGGTGTCCTGAACACAAAGGAATGAGAGCTAATGTTTCCATTGCCAAAGCAATCAGTGTAGCCAAGTCAGAGAGCAATGTTTCACAAACAGTGGTTGGGAGTCCTGTTGATGAAAGCCTGACAAACACCAATATATGTGGAATCATCTTAAATGATGGCTCCACCTGCAGAAGGCAACCAGTTGAAGGAAGGAAAAGGTGTCATGAGCACAAAGGGAGGAGAATTGGTGCATCTGTTCAAAAAAGGGGCAACGGATACAGATACCAAAATGTTAGCCATGGTGTAGAAGATTCCCTACAAACACTGGTAGGGAGTCCTGTTGATGAGAGTATCTCAAACACAATTTGTGGAATCATCTTAAATGATGGCTCTGCCTGTACAAGACAACCAGTTAAAGGAAGAAAAAGGTGCCATGAGCACAAAGGGAGAAGAACTCGTGCATCTTTTCATGTAAATCAGAAATAA 1302 0.4455 MAAVAVTRLKREQCNRTKHDSSFSHWKILIGPSDWEDHSKGKEGCARYRIHNLPQESNPGVYELGIAVAGGGLGRQISKLAPHPDRIVVVYLGQADNVRTRLQCYGRTGAHLESAISDDSSLQKGLPLFQEVFSQGFSIVYRWAPTRNKEDALRTEDQLLRTFDYAWNTSNNGIRRPEEILQKLQKIASGTRTLSDVAKVLLPFTQKQVGIRIKSCKLPQEDDNGSYNFLTRVFSFNRSRPRIVQSTTGVVQEQENAKICGVSLGDGLICRRPPAEKRLRCPEHKGMRANVSIAKAISVAKSESNVSQTVVGSPVDESLTNTNICGIILNDGSTCRRQPVEGRKRCHEHKGRRIGASVQKRGNGYRYQNVSHGVEDSLQTLVGSPVDESISNTICGIILNDGSACTRQPVKGRKRCHEHKGRRTRASFHVNQK* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02328 433 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 305 368 IPR038909 GO:0003677|GO:0006355
Phac4g02328 433 Pfam GIY-YIG domain-containing protein 23 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02328 Phac-Chr4 49456535 49458810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02328 3 423 HRT Transcription Factor Family AT5G56780 38.797 2.36e-98 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Phac4g02328 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02328 - - gmx:100784450 603.979