Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02316 ATGGGAAGGGCTCCATGCTGTGACAAATCCATCGTCAAAAGAGGGCCATGGTCTCCCGATGAAGATGTCACCCTCAAAAACTTCCTTGAGAAACATGGCACAGGGCTTAAGCGTTGTGGAAAGAGCTGTCGTCTAAGATGGCTGAACTATCTGAGGCCTCATATTAAGCTTGGAGGTTTCACTGAAGAGGAAGACAAAATTATCTGCACCCTTTATGGCACAATAGGAAGCAGGTGGTCCCTTATAGCAGCTCAACTCCCTGGGAGAACAGACAATGATGTCAAAAATCACTGGAACACCAAGCTAAAGAAAAAGTTCTTGGCAGAAAACACTGTTGCCACAACCTACAACAATGGCACTCTCAGCAATAGTAGTTCCTCTCACCAATTCTCATCTTTTACTACTCAACCTCAAGTTGAAGCCTCTGTCTTGAATCAGAAACAGAACTCAGCTTGGTTTGACCCCTACAATATTTTGGATTTGGAACAAACACCAATGCCAGTTCCTCTTCCAATGCCTCAGGAATTGGAAGCATTTGATACTGGGGGTAGCAGTTATAGTGCACCACCCTCCAAGGAAGTTTCAATGCCAGTTTTGAATGCAGCTTCATTAGCACAGCAGAACAAACATACAGAATGGTTTGGCTATGACTATGCAGGGGAAGATGATCCAAATTTACTTGAATTTGTGCTAGACGATCTGCTGATTAATCATGGGTTTGCATCTCCATCATGTGTGGCTAACCAAGACTCATTCTACTCATCATCAAACACTTGA 777 0.4363 MGRAPCCDKSIVKRGPWSPDEDVTLKNFLEKHGTGLKRCGKSCRLRWLNYLRPHIKLGGFTEEEDKIICTLYGTIGSRWSLIAAQLPGRTDNDVKNHWNTKLKKKFLAENTVATTYNNGTLSNSSSSHQFSSFTTQPQVEASVLNQKQNSAWFDPYNILDLEQTPMPVPLPMPQELEAFDTGGSSYSAPPSKEVSMPVLNAASLAQQNKHTEWFGYDYAGEDDPNLLEFVLDDLLINHGFASPSCVANQDSFYSSSNT* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02316 258 Gene3D - 13 56 - -
Phac4g02316 258 SUPERFAMILY Homeodomain-like 13 98 IPR009057 -
Phac4g02316 258 PANTHER OS09G0431300 PROTEIN 1 169 - -
Phac4g02316 258 ProSiteProfiles Myb-like domain profile. 52 102 IPR001005 -
Phac4g02316 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 106 IPR017930 -
Phac4g02316 258 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 51 IPR017930 -
Phac4g02316 258 SMART sant 56 104 IPR001005 -
Phac4g02316 258 SMART sant 13 53 IPR001005 -
Phac4g02316 258 CDD SANT 60 102 IPR001005 -
Phac4g02316 258 Gene3D - 59 131 - -
Phac4g02316 258 Pfam Myb-like DNA-binding domain 60 100 IPR001005 -
Phac4g02316 258 Pfam Myb-like DNA-binding domain 14 51 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02316 Phac-Chr4 49229004 49230781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02316 1 109 MYB Transcription Factor Family AT5G57620 70.833 1.93e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac4g02316 Myb_DNA-binding 3.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02316 K09422 - gmx:778160 336.65