Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02306 ATGAGTAAGATGAGCAACTTGAGTTCTGTGAGCAGTTCTGATCTCATAGATGCAAAGCTTGAAGAGCATCAATTGTGTGGATCCAAGCAGTGCCCTGGTTGCGGACACAAGTTTGAAGGGAAGCCGGACTGGCTTGGCCTGCCAGCAGGAGTGAAGTTTGATCCCACAGACCAAGAACTGATAGAACATCTTGAAGCCAAAGTGGAGGCCAAGAACATGAAATCACACCCTTTGATAGATGAGTTCATTCCCACTATTGAAGGAGAAGATGGAATTTGTTATACACATCCTGAGAAACTTCCAGGAGTAACAAGAGATGGATTGAGCAGGCACTTCTTCCATAGACCTTCAAAGGCTTACACAACTGGGACAAGAAAGAGGAGAAAGATTCAAAACGAATGTGACTTGCAAGGTGGAGAAACAAGGTGGCACAAGACAGGTAAGACCAGGCCAGTGATGGTGAATGGAAAACAAAAGGGTTGCAAGAAAATTCTTGTGCTCTACACCAACTTTGGGAAGAACAGAAAGCCAGAGAAAACCAACTGGGTGATGCACCAATACCATTTGGGGCAGCATGAAGAAGAGAAAGAGGGAGAGCTTGTGGTGTCAAAGATATTCTATCAGACACAGCCAAGACAGTGCAACTGGTCAGATAGAAGTGCAACAACTGAAGGAAGTGGAGAACCTAACAACAACAGTAGCAGAAGGGACAGTGGAAGTGGAAGTTCTTCTTCCAAAGAAATTGTTACTCACAGAGATGAGATGTCTGCTCCAATCACAACTTTCACTCATCACCCTTTCGACATCCACCATCTAAAACCCGATCACTTTAGCTTCATCCCTTTCAGGAAAACCTTTGATGAGGTTGGAATGGGAGAGGCTTCCACAGCAAGGGAAGTTGTGCAAGCATCAGGTTCATGTGAAGATGTGCATGAACGGCAGAGAGCACAACATGTAGCTCATCATCATCAACAACAACACCAGCAGCAGCATGCTCATCATCAGATTTCAAACTCTTTTCATATCAGTAGGCCGTCACATCCCATCTCTACCATTATCTCTCCACCTCCCCTCCACCACACTTCCATCATTCTCGATGACAACTCTTACCACCATGTCTCTAGAATAATGCTCCAAAATGAAAATTTTCAGCAACAACAGCAACAGCATCATAAGCTTGGAGGAAGGTCTGCGTCTGGTTTGGAGGAACTCATCATGGGTTGCACTTCAACTGAAATCAAAGAGGAGTCATCCATGACAAACCCACAAGAAGCTGAATGGTTGAAGTACTCTTCTTACTGGCCAGACCCTGACAACCCGGATCATCATGGGTAG 1335 0.4509 MSKMSNLSSVSSSDLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWLGLPAGVKFDPTDQELIEHLEAKVEAKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDRSATTEGSGEPNNNSSRRDSGSGSSSSKEIVTHRDEMSAPITTFTHHPFDIHHLKPDHFSFIPFRKTFDEVGMGEASTAREVVQASGSCEDVHERQRAQHVAHHHQQQHQQQHAHHQISNSFHISRPSHPISTIISPPPLHHTSIILDDNSYHHVSRIMLQNENFQQQQQQHHKLGGRSASGLEELIMGCTSTEIKEESSMTNPQEAEWLKYSSYWPDPDNPDHHG* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02306 444 Pfam No apical meristem (NAM) protein 48 189 IPR003441 GO:0003677|GO:0006355
Phac4g02306 444 MobiDBLite consensus disorder prediction 214 246 - -
Phac4g02306 444 ProSiteProfiles NAC domain profile. 47 208 IPR003441 GO:0003677|GO:0006355
Phac4g02306 444 SUPERFAMILY NAC domain 43 208 IPR036093 GO:0003677|GO:0006355
Phac4g02306 444 Gene3D NAC domain 56 212 IPR036093 GO:0003677|GO:0006355
Phac4g02306 444 MobiDBLite consensus disorder prediction 214 250 - -
Phac4g02306 444 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 9 329 IPR044799 GO:0003700
Phac4g02306 444 FunFam NAC domain-containing protein 73 56 212 - -
Phac4g02306 444 MobiDBLite consensus disorder prediction 320 345 - -
Phac4g02306 444 MobiDBLite consensus disorder prediction 330 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02306 Phac-Chr4 49170834 49177000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02306 11 441 NAC Transcription Factor Family AT5G56620 53.982 3.53e-141 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac4g02306 NAM 2.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02306 - - gmx:100795246 748.043