Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02305 ATGAAATCACACCCTTTGATAGATGAGTTCATTCCCACTATTGAAGGAGAAGATGGAATTTGTTATACACATCCTGAGAAACTTCCAGGAGTAACAAGAGATGGATTGAGCAGGCACTTCTTCCATAGACCTTCAAAGGCTTACACAACTGGGACAAGAAAGAGGAGAAAGATTCAAAACGAATGTGACTTGCAAGGTGGAGAAACAAGGTGGCACAAGACAGGTAAGACCAGGCCAGTGATGGTGAATGGAAAACAAAAGGGTTGCAAGAAAATTCTTGTGCTCTACACCAACTTTGGGAAGAACAGAAAGCCAGAGAAAACCAACTGGGTGATGCACCAATACCATTTGGGGCAGCATGAAGAAGAGAAAGAGGGAGAGCTTGTGGTGTCAAAGATATTCTATCAGACACAGCCAAGACAGTGCAACTGGTCAGATAGAAGTGCAACAACTGAAGGAAGTGGAGAACCTAACAACAACAGTAGCAGAAGGGACAGTGGAAGTGGAAGTTCTTCTTCCAAAGAAATTGTTACTCACAGAGATGAGATGTCTGCTCCAATCACAACTTTCACTCATCACCCTTTCGACATCCACCATCTAAAACCCGATCACTTTAGCTTCATCCCTTTCAGGAAAACCTTTGATGAGGTTGGAATGGGAGAGGCTTCCACAGCAAGGGAAGTTGTGCAAGCATCAGGTTCATGTGAAGATGTGCATGAACGGCAGAGAGCACAACATGTAGCTCATCATCATCAACAACAACACCAGCAGCAGCATGCTCATCATCAGATTTCAAACTCTTTTCATATCAGTAGGCCGTCACATCCCATCTCTACCATTATCTCTCCACCTCCCCTCCACCACACTTCCATCATTCTCGATGACAACTCTTACCACCATGTCTCTAGAATAATGCTCCAAAATGAAAATTTTCAGCAACAACAGCAACAGCATCATAAGCTTGGAGGAAGGTCTGCGTCTGGTTTGGAGGAACTCATCATGGGTTGCACTTCAACTGAAATCAAAGAGGAGTCATCCATGACAAACCCACAAGAAGCTGAATGGTTGAAGTACTCTTCTTACTGGCCAGACCCTGACAACCCGGATCATCATGGGTAG 1119 0.4441 MKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDRSATTEGSGEPNNNSSRRDSGSGSSSSKEIVTHRDEMSAPITTFTHHPFDIHHLKPDHFSFIPFRKTFDEVGMGEASTAREVVQASGSCEDVHERQRAQHVAHHHQQQHQQQHAHHQISNSFHISRPSHPISTIISPPPLHHTSIILDDNSYHHVSRIMLQNENFQQQQQQHHKLGGRSASGLEELIMGCTSTEIKEESSMTNPQEAEWLKYSSYWPDPDNPDHHG* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02305 372 FunFam NAC domain-containing protein 73 1 140 - -
Phac4g02305 372 Pfam No apical meristem (NAM) protein 3 117 IPR003441 GO:0003677|GO:0006355
Phac4g02305 372 MobiDBLite consensus disorder prediction 142 178 - -
Phac4g02305 372 MobiDBLite consensus disorder prediction 258 273 - -
Phac4g02305 372 SUPERFAMILY NAC domain 4 136 IPR036093 GO:0003677|GO:0006355
Phac4g02305 372 MobiDBLite consensus disorder prediction 142 174 - -
Phac4g02305 372 MobiDBLite consensus disorder prediction 248 273 - -
Phac4g02305 372 Gene3D NAC domain 1 140 IPR036093 GO:0003677|GO:0006355
Phac4g02305 372 ProSiteProfiles NAC domain profile. 1 136 IPR003441 GO:0003677|GO:0006355
Phac4g02305 372 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 2 257 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02305 Phac-Chr4 49170834 49177000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02305 3 369 NAC Transcription Factor Family AT5G56620 51.579 1.20e-108 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac4g02305 NAM 3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02305 - - gmx:100795246 608.601