Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02290 ATGGGGAACAAAATCGCGCGCACGACGCAGGTTTCGGCGTCGGAGTACTACCTCCACGACCTTCCGTCGACCTACAATCTCGTTCTCAAGGAGGCGTTAGGTCGCGGCCGTTTCTTCAAGTCCATTCAGTGCAAACACGACGAGGGTTTGGTCCTCGTCAAGGTCTATTTCAAGCGAGGCGATTTCCTTGATCTCTCCGACTACGAACGCCGTCTCTCTCAGATCAAACAAATTTTCAGCTCCATCGATCATCCTCACGTTTGGCCGTTTCAGTTTTGGCAAGAAACGGACAAAGCAGCGTACCTTTTGAGACAGTATTTCTTCCATAATCTGCATGATAGGTTAAGTACTCGACCTTTTCTTAGTCTTGTTGAGAAGAAATGGTTGGCTTTTCAGTTGCTTGTAGCTGTAAACCAGTGCCACGAGAATGGAGTATGTCACGGTGATATCAAGTGTGAGAATGTGCTGATTACCTCCTCCAATTGGCTTTACCTTGCTGACTTTGCATCTTTCAAACCCACATACATTCCGTATGATGACCCATCTGATTTCTCTTTTTTCTTTGACACTGGTGGACGAAGACTATGTTATCTTGCACCTGAGAGATTTTATGAACATGGAGGCGAGATGCAGATGGCACAAGATACCCCCTTAAAACCCTATATGGATATATTTGCTGTTGGGTGTGTAATTGCTGAACTTTTCCTTGAGGGGCAGCCACTATTTGAACTGTCTCAACTTCTTGCTTATCGCAGAGGGCAATATGATCCAAGTCAACACCTTGAAAAAATACCGGATATTGGAATCCGTAAAATGATATTGCACATGATTCAGTTAGAACCCGAGTCCCGATTTTCTGCTGAAAGATATCTGAAGGAATATGCTGCAGTTGTTTTTCCGATTTATTTTTCACCATTTCTTCATGATTTTTACCGTTGCTGGAGTCCTCTTCATTCTGACATGAGGGTTTTGCTATGCCAAAGTGCTTTTCCGGAGATACTCAAACAAATGATGAACAATAAGTCATCTGATGATGCAGGTGCTAATTCCGGGGAACTTTTGGAAGAGATGGTTGCTAAAGAAAGTGTGAGTTTCTTGAAGGATTCACTGAGGAAGAGAGAAGACATAGGAAAAGGCTTAGAAGTTCTTGGTGATATTAATGGCCTACCGAGGGATGCGAAAATAAATAATAATCCATCGGATGTAGCAGGAAAGGCACATAATTCAACTTTCCCCGAAAATCTAACAAATCTTCAAACTGATACATTTGGAATGCCTTTTCTACCGTTACCAAAGGATAGTATGCGATGTGAAGGCATGGTTTTGATAACTTCTTTGCTGTGCTCTTGCATACGCAATGTCAAGTTGCCTCACCTGAGGAGGGCAGCTGTACTCTTGTTGAAGGCTTCTGCTCTATATATTGATGATGAAGATCGTTTGCAGCGTGTTATACCATATGTGATTGCAATGCTTTCAGATGCAGCAGCAATTGTCCGTTGTGCTGCTTTGGAGACTTTGTGTGACATTCTTCCCTTAGTGAGGGATTTTCCTCCCAGTGATGCGAAGATATTTCCTGAGTATATTTTTCCAATGCTTTCTATGCTTCCTGATGATCCTGAGGAAAGTGTGAGGATATGCTATGCCAGCAATATAGCTAAACTGGCGTTGACTGCTTATGGATTTCTGATACACTCAGTAAGCTTGAGTGAGGCAGGTGTCCTTGATGAATTGAGTTTGTCACAGAAGCCATTGACATCATCCACTCAGACCTCTGGAAGAATGAAGAGGATAAATGGTGATGTTCAACTTCTGCAGCTGAGGAAATCCATTGCGGAGGTTGTCCAAGAACTTGTTATGGGTCCTAAGCAAACCCCAAATATAAGGAGAGCACTTCTTCAGGATATTGGCAAACTGTGCTACTTCTTTGGTGTAAGACAGAGTAATGACTCTCTTTTACCCATTCTTCCTGCTTTCTTAAATGATCGGGATGAGCAATTAAGGACAGTATTCTATGAAAAAATAGTTTATGTCTGCTTTTTTGTGGGGCAAAGAAGTGTAGAAGAATATTTATTACCTTATATTGAGCAAGCTTTAAGTGACATGACAGAATCAGTCATTGTTAAAGCCGTAGAATGTATGTCTATTCTATGTAAAAGTGGTTTCTTCCGGAAGAGAACATTGCTTCAAATGATAGATCGTGGCTTTCCTTTATTGTGTTATCCTAGTGAATGGGTACGGAGATCAGTTGTCTCTTTTATTGCTGCTAGCAGTGAGTGCCTGGGTGCAACAGATTCTTATGTTTACCTTGCTCCTGTTATACGGCCTTTCCTCCGCAGGAAACCTGTGTCTCTTGTTTCCGAAAGGGATCTGCTTTCATGTTTAAAACCTCCTGTCTCAAGACAGGTTTACTATGAAGTCTTGGAGAACTCTAGGAGTTCAGACATGTTAGAAAGACAAAGAAAAATATGGTATAGTTCTTCACAGTCTAAACTATGGGAAATGGATTTACTGAAAAAAGGAATTGAAGAGTTGGACTCATTGAAGAACTGGAGTGACAAGCAACAAGGTCCTGGGGTTCAACAAACTGTCGGCACTGCCTTCCAACAGCCAGGGATAACTGATTGTGACAAAGCTGAGGCAAAATTGAGAGATATGGGAGCCTTTATGCATAATGATAGCAATGTGGGGCATCGTGATACCCAAGGCTTGGAGAAGTTACAGTTTTCAGGATTTATGTCACCAAATTTTAGTGGCGTGAACAGTTTGACGTTTGAAAAGCCATCAGAAGGCATACCTCTGTACTCCTTCAGTGTGGACAGGCGAGGAATGGGAGTGCCCCCTGCTGCATCTGATCCTCCATTGCCAATGAATTCTCTGGGTGTTAGTTCATCTGCAATGCCTTGGGTTAATCCACTTAGCAAGTCCTTTAATTTGGCTAGTTCAGTTCCAGCACCAAAGCTTTTTTCTGGTTCTTTTAGTATCAGCAATGGCTCTAAACAGTTCCATCGAGTGGTACATGAACCAGATGCAAGGGAAAATGAGACGGCCTATATTAATAGCACATTTCAAGATTTGGGATCATCTGCTAATGTTAAAGGTACTTCAATTTCACTGGAAGATGCAACTGCCCAAACTGATCTATCAGGATTTCCATCCTTTGCTCGAGCTTCCATTCCCGATTCTGGTTGGAGGCCCCGAGGGGTGTTGGTTGCACATCTCCAGGAGCACCGATCAGCTGTCAATGACGTTGCTATATCTGCTGACCATAGTTTCTTTGTGAGTGCATCTGATGATTCTACAGTCAAGATTTGGGATTCCAGAAAGCTAGAAAAGGACATTTCATTCAGGTCTAAGCTAACTTATCACCTGGAGGGAAGCCGTGTGTTGTGTGCAGCAATGCTTCCAGGTTCTGCTCAAGTTATCATTGGAACATCTGATGGATTTATTCATATGTTTTCTGTTGATCATATATCTAAAGGTCTAGGACATGTTGTCGAGAAATATTCTGGCATTGCTGATATCACAAAGAAGGATATCAAAGAAGGTGCCGTACTCAACCTCTTGAACTGCCCTGTGGATAATTATACCATTATGTATAGCACACAGAACTGTGGCATTCATCTGTGGGATACTAGGTCAAATTCCAATACCTGGAATCTTAAAGCTACTCCTGAGGAGGGCTATGCTTCTTCTCTAGCATCAGGGCCTTGTGGTAATTGGTTTGTATCAGGGTCATCCCGGGGGGTTATTACACTTTGGGACCTGAGGTTTCTTATACCTGTTAACTCTTGGCAGTATTCTCTTGCTTGCCCTATAGAAAAGATGTGTCTCTTTCTTCCTCCGTCAAATGCTTCTCTGTCTTCAGCTGCTAGACCCCTTGTTTATGTGGCTGCTGGTTGCAATGAAGTTTCTCTTTGGAATGCGGAGAATGGTAGCTGCCACCAGGTCCTAAGGATGGCCAATTATGACAGCGATGCCGAAATGTCTGATCTGCCTTGGGCCTTGGCCAGACCTTCAGGTAAGCCAACTTCTCAATCAGATCTAAGACGGAATGTTAATCGCAAGTATGGAGTTGATGAGGTAAACGAACCTCCTTCTCGTCTTCCTGGTATCCGTTCATTACTTCCCTTGCCTGGGGGCGATTTGTTGACTGGAGGCACTGATTTAAAGATACGTCGGTGGGATCATTACAGTCCTGACAGAAGTTACTGTATTTGCGGACCAAACATAAAAGGAATAGGAAATGATGATTTTTATGAAACAAAATCTAGTTTTGGGGTGCAAGTTGTACAGGAGACAAAAAGACGTCCTCTTACAATCAAGCTGACAGCAAAGGCGATTCTTGCGGCTGCTGCCACTGATTCTGGTGGTTGCCATCGTGACTCCATTGTTTCTTTGGCTTCTATTAAGTTAAACCAGAGACTCTTACTTTCAAGTAGTAGAGATGGGGCCATCAAGGTTTGGAAGTAA 4470 0.4286 MGNKIARTTQVSASEYYLHDLPSTYNLVLKEALGRGRFFKSIQCKHDEGLVLVKVYFKRGDFLDLSDYERRLSQIKQIFSSIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSLVEKKWLAFQLLVAVNQCHENGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQMAQDTPLKPYMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDIGIRKMILHMIQLEPESRFSAERYLKEYAAVVFPIYFSPFLHDFYRCWSPLHSDMRVLLCQSAFPEILKQMMNNKSSDDAGANSGELLEEMVAKESVSFLKDSLRKREDIGKGLEVLGDINGLPRDAKINNNPSDVAGKAHNSTFPENLTNLQTDTFGMPFLPLPKDSMRCEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYIDDEDRLQRVIPYVIAMLSDAAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYIFPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSVSLSEAGVLDELSLSQKPLTSSTQTSGRMKRINGDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGVRQSNDSLLPILPAFLNDRDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDMTESVIVKAVECMSILCKSGFFRKRTLLQMIDRGFPLLCYPSEWVRRSVVSFIAASSECLGATDSYVYLAPVIRPFLRRKPVSLVSERDLLSCLKPPVSRQVYYEVLENSRSSDMLERQRKIWYSSSQSKLWEMDLLKKGIEELDSLKNWSDKQQGPGVQQTVGTAFQQPGITDCDKAEAKLRDMGAFMHNDSNVGHRDTQGLEKLQFSGFMSPNFSGVNSLTFEKPSEGIPLYSFSVDRRGMGVPPAASDPPLPMNSLGVSSSAMPWVNPLSKSFNLASSVPAPKLFSGSFSISNGSKQFHRVVHEPDARENETAYINSTFQDLGSSANVKGTSISLEDATAQTDLSGFPSFARASIPDSGWRPRGVLVAHLQEHRSAVNDVAISADHSFFVSASDDSTVKIWDSRKLEKDISFRSKLTYHLEGSRVLCAAMLPGSAQVIIGTSDGFIHMFSVDHISKGLGHVVEKYSGIADITKKDIKEGAVLNLLNCPVDNYTIMYSTQNCGIHLWDTRSNSNTWNLKATPEEGYASSLASGPCGNWFVSGSSRGVITLWDLRFLIPVNSWQYSLACPIEKMCLFLPPSNASLSSAARPLVYVAAGCNEVSLWNAENGSCHQVLRMANYDSDAEMSDLPWALARPSGKPTSQSDLRRNVNRKYGVDEVNEPPSRLPGIRSLLPLPGGDLLTGGTDLKIRRWDHYSPDRSYCICGPNIKGIGNDDFYETKSSFGVQVVQETKRRPLTIKLTAKAILAAAATDSGGCHRDSIVSLASIKLNQRLLLSSSRDGAIKVWK* 1490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02290 1489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Phac4g02290 1489 Gene3D - 998 1172 IPR015943 GO:0005515
Phac4g02290 1489 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1489 IPR045162 GO:0004674|GO:0016236|GO:0045324
Phac4g02290 1489 CDD STKc_Vps15 16 303 - -
Phac4g02290 1489 Gene3D - 435 566 IPR011989 -
Phac4g02290 1489 ProSiteProfiles HEAT repeat profile. 651 689 IPR021133 -
Phac4g02290 1489 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02290 1489 Pfam HEAT repeat 483 511 IPR000357 GO:0005515
Phac4g02290 1489 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1456 1489 - -
Phac4g02290 1489 FunFam Protein kinase family protein / WD-40 repeat family protein 1057 1343 - -
Phac4g02290 1489 ProSiteProfiles Trp-Asp (WD) repeats profile. 1073 1105 IPR001680 GO:0005515
Phac4g02290 1489 FunFam phosphoinositide 3-kinase regulatory subunit 4-like 429 568 - -
Phac4g02290 1489 Gene3D - 1278 1489 IPR015943 GO:0005515
Phac4g02290 1489 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1073 1105 - -
Phac4g02290 1489 SUPERFAMILY Protein kinase-like (PK-like) 26 322 IPR011009 -
Phac4g02290 1489 Gene3D Transferase(Phosphotransferase) domain 1 22 300 - -
Phac4g02290 1489 FunFam Protein kinase family protein / WD-40 repeat family protein 579 789 - -
Phac4g02290 1489 FunFam Protein kinase family protein / WD-40 repeat family protein 24 347 - -
Phac4g02290 1489 Gene3D - 567 784 IPR011989 -
Phac4g02290 1489 Pfam WD domain, G-beta repeat 1069 1105 IPR001680 GO:0005515
Phac4g02290 1489 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02290 1489 SMART WD40_4 1066 1105 IPR001680 GO:0005515
Phac4g02290 1489 SMART WD40_4 1114 1153 IPR001680 GO:0005515
Phac4g02290 1489 SMART WD40_4 1449 1489 IPR001680 GO:0005515
Phac4g02290 1489 SMART WD40_4 1217 1254 IPR001680 GO:0005515
Phac4g02290 1489 SMART WD40_4 1361 1395 IPR001680 GO:0005515
Phac4g02290 1489 ProSiteProfiles Trp-Asp (WD) repeats profile. 1472 1489 IPR001680 GO:0005515
Phac4g02290 1489 SUPERFAMILY WD40 repeat-like 1067 1489 IPR036322 GO:0005515
Phac4g02290 1489 SUPERFAMILY ARM repeat 437 777 IPR016024 -
Phac4g02290 1489 Gene3D - 1173 1265 IPR015943 GO:0005515
Phac4g02290 1489 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02290 Phac-Chr4 49080574 49090703 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02290 26 291 EF-hand Containing Proteins AT5G23580 25.448 9.89e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Phac4g02290 Pkinase 4.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02290 K08333 - gmx:100818467 2754.93