Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02289 ATGTCAAACTTGCATTACATGTTCATCTTGTTAGCAGTTCTTCTTCTTTTTCTGCAAAATTCCAGCAGAGTTCATTGCCATACCAAGGGACTTAGACCAAGGCGTTCTGAGGGTAAAGGGTTGTCGACCAACGTGACTAGAGTGCAGTATTCTGAAGAGCAATTCATGAAATGGGTGAACTTTGTTGGTTCCCTCAAACACTCAGTTTTTAAGGCAGTCAAAAATAAGCTTGTGGCTTCCTACACTTTGCATGTTGATAAGGATCCCAGTGTTGGAGATTTTACCTCAATTCAAGAAGCCATTGATTCCCTACCATTCATCAATCTTGTGAGAGTGGTCATAAAAGTCCATGCAGGTGTCTACACAGAGAAAGTTAACATTCCTGCTTTCAAATCCTACATAACAATAGAGGGAGCTGGTGCAGATGAAACCATTGTTAAATGGAGTGACACTGCTCAAACACCTGGTTCAAATGGGAGGCCACTAGGAACCTATGGTTCAGCAACTTTTGCAGTGAATTCACCTTATTTCATTGCCAAGAACATCACATTCCAAAACACAACTCCTGTTCCTGCTCCAGGAGCAATTGGAAAGCAAGCAGTGGCATTAAGGATTTCAGCAGACACAGCAGCATTCGTAGGCTGCAAATTCTTGGGAGCACAAGACACACTCTATGATCATGTGGGCAGACATTACTATAAGGATTGTTACATTGAAGGCTCTGTTGATTTCATATTCGGCAACTCTCTCTCACTGTTTGAGGGATGTCACGTGCATGCAATAGCACAGAATACAGGGGCAGTAACAGCTCAAGGAAGGAGCAGTATGTTGGAGGACACAGGGTTCTCATTTGTGAACTGTAAGGTCACGGGATCAGGGGCACTATACCTTGGAAGGGCATGGGGACCCTTTTCTCGCGTGGTCTTTGCTTACACATATATGGACAACATCATCATTCCCAAAGGCTGGTATAACTGGGGTGACCCTAACCGTGAAATGACTGTTTTCTATGGGCAGTACAAGTGCACAGGAGCTGGTGCAAGTTTTGCAGGGAGAGTAGCATGGTCAAGAGAACTCACTGATGAAGAAGCTATACCTTTTCTTTCACTTGGCTTTATTGATGGAACTGAATGGATCCAATTGTAG 1146 0.4372 MSNLHYMFILLAVLLLFLQNSSRVHCHTKGLRPRRSEGKGLSTNVTRVQYSEEQFMKWVNFVGSLKHSVFKAVKNKLVASYTLHVDKDPSVGDFTSIQEAIDSLPFINLVRVVIKVHAGVYTEKVNIPAFKSYITIEGAGADETIVKWSDTAQTPGSNGRPLGTYGSATFAVNSPYFIAKNITFQNTTPVPAPGAIGKQAVALRISADTAAFVGCKFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNSLSLFEGCHVHAIAQNTGAVTAQGRSSMLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGAGASFAGRVAWSRELTDEEAIPFLSLGFIDGTEWIQL* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02289 381 ProSitePatterns Pectinesterase signature 2. 238 247 IPR033131 -
Phac4g02289 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 74 380 - -
Phac4g02289 381 FunFam Pectinesterase 79 381 - -
Phac4g02289 381 Pfam Pectinesterase 91 375 IPR000070 GO:0030599|GO:0042545
Phac4g02289 381 Gene3D - 78 381 IPR012334 -
Phac4g02289 381 SUPERFAMILY Pectin lyase-like 78 380 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02289 Phac-Chr4 48931525 48936951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02289 2 379 Carbohydrate Esterase AT5G47500 44.063 2.76e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02289 K01051 - gmx:100793314 725.317