Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02288 ATGGGAAGAGCCACAAGGTGGGTGAAGAGTTTGTTTGGGATTACAAGAGAGAAAGAGAAGAAGAAAAACTCAAAGGGTGGAGAGGCCAAGAGCACTGAATCAGGTTGTTCTGAGAGTACTAGTAATTCAAGAGCTTTGTGCCACAATCCAGGGACTATACCTCCCAACATTTCTCAAGCTGAGGCAGCTTGGTTACAGTCATTCTACACAGAGAAGGACAACAACAAGCATGCCATTGCAGTTGCTGCCGTCACTGCAGCTGCGGCGGATGCTGCTGTGGCTGCAGCACAGGCTGCTGTAGCAGTTGTTAGACTCACAAGCCAAGGAAGGGGTGGCACCATGTTTGGAGTTGGACCTGAGATATGGGCTGCTATCAAGATTCAAGCAGTGTTTAGAGGATACCTCGCAAGGAAGGCATTGAGGGCATTAAAAGGATTGGTGAAGTTGCAGGCACTTGTCAGAGGGTATTTAGTGAGGAAGCAAGCAACAGCAACCCTGCATAGTATGCAGGCTCTTGTTAGAGCTCAAGCTACACTAAGGTCCCACCAATCTCACAGGCTCATTAGTACTAAGAATGAAGCATTTAGATCTCAACATAGAGCAAGAAGATCCATGGAGAGGTTTGATGATACTAGGAGTGAGTATGCAGTTCCAATCCACATTAGAAAAGCATCATCTTCTTTTGATGCTACAGTTAACATCAACAACAGTGTTGATGGGAGCCCCAAAACAGTGGAAGTGGACACTTTCAGGCCTAAGTCAAGGTCAAGAAGGTCAAGAAGGACAATATCAGATTTTGGTGATGAGCCATCACTTCAGGCACTTTCCTCTCCCATCTTCCCAATTTCATATAGAGTTACCCCTACACGTTGGTCCATACCAGACCAAAGGAATTTTCAGGACTCTGAATGGGGGTTAACAGGAGAAGAATGTCGGTTCTCTACAGCACAAAGCACTCCACGCTTCACAAATCCTTGTAGTTGTGGCTCAGTTGCACCTATGACAAATGATAACTTGTTCCTAAGGCAATATGGGAAATTTCCAAACTACATGGCTAGTACTCAGTCTTTTAAGGCCAAGTTGAGGTCTCATAGTGCTCCAAAGCAAAGACCAGAACCAAGTCCAAGGAAAAGGCTCTCCCTCAATGAAATGATGGAGTCCAGGAGTAGCTTGAGTGGTGTTAGAATGCAGAGGTCTTGCTCAAAGGCTCAAGAAGTCATTAATTTCAAGAATGCTGTGATGGGAAAGCTTCAGAAATCCACAGAATCTGTTAGGGTGGCAGACAGAAACTATTTCCACCAGAGAGGGTGGTGA 1314 0.4551 MGRATRWVKSLFGITREKEKKKNSKGGEAKSTESGCSESTSNSRALCHNPGTIPPNISQAEAAWLQSFYTEKDNNKHAIAVAAVTAAAADAAVAAAQAAVAVVRLTSQGRGGTMFGVGPEIWAAIKIQAVFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALVRAQATLRSHQSHRLISTKNEAFRSQHRARRSMERFDDTRSEYAVPIHIRKASSSFDATVNINNSVDGSPKTVEVDTFRPKSRSRRSRRTISDFGDEPSLQALSSPIFPISYRVTPTRWSIPDQRNFQDSEWGLTGEECRFSTAQSTPRFTNPCSCGSVAPMTNDNLFLRQYGKFPNYMASTQSFKAKLRSHSAPKQRPEPSPRKRLSLNEMMESRSSLSGVRMQRSCSKAQEVINFKNAVMGKLQKSTESVRVADRNYFHQRGW* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02288 437 PANTHER IQ-DOMAIN 5-RELATED 1 386 - -
Phac4g02288 437 MobiDBLite consensus disorder prediction 246 265 - -
Phac4g02288 437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 162 IPR027417 -
Phac4g02288 437 MobiDBLite consensus disorder prediction 241 269 - -
Phac4g02288 437 Pfam Protein of unknown function (DUF4005) 316 395 IPR025064 -
Phac4g02288 437 ProSiteProfiles IQ motif profile. 123 148 IPR000048 GO:0005515
Phac4g02288 437 MobiDBLite consensus disorder prediction 16 52 - -
Phac4g02288 437 MobiDBLite consensus disorder prediction 29 52 - -
Phac4g02288 437 Pfam IQ calmodulin-binding motif 147 161 IPR000048 GO:0005515
Phac4g02288 437 Pfam IQ calmodulin-binding motif 122 141 IPR000048 GO:0005515
Phac4g02288 437 ProSiteProfiles IQ motif profile. 144 171 IPR000048 GO:0005515
Phac4g02288 437 Gene3D - 120 171 - -
Phac4g02288 437 SMART iq_5 142 163 IPR000048 GO:0005515
Phac4g02288 437 SMART iq_5 119 141 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02288 Phac-Chr4 48927278 48929815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02288 1 396 IQD Protein Family AT3G16490 48.910 1.65e-90 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02288 - - gmx:100788710 626.32