Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02284 ATGAAAAAAATTACCTCATCATGTGTCAAAATGCCAATTCTCCCTCTTCTCTCCTTCCTCTTTCTGATCTTTGCACACTCTCAGTCTCACTCTTTGCTGTATGATCAAGAGCATGCAGTCCTTTTGAAGATAAAACAATACCTGCAAAATCCACCATTCCTTCATCACTGGATCCCATCAAACTCCTCACATTGCACTTGGCCAGAGATCAGATGCACCAATGGCTCAGTCACTTCATTGACTATGTTCAACACCAACATCACTCAAACACTTCCACCTTTCCTATGTGACCTCAAAAGCCTCACACATATAGATTTTCAGTTGAATTTCATTCCTGGGGAGTTCCCCACATCTCTCTACAACTGCTCCAAGCTTGAGTACCTTGACCTCTCACAGAACATCTTTGTTGGTAAGATTCCTGATGACATTCACCACTTGGCTAGCCTAAGTTTTCTTAGTCTTGGTGGCAACAACTTCTCTGGTGATATTCCAGCCAGCATAGGGAGGTTGAAGGAGCTGAGAAGCCTTTATCTTCATCAGTGTCTTTTCAATGGTACTTTCCCTGCTGAAATTGGGAACTTGTCCAACCTTGAGTTGCTGCATGCTTTCTCAAACCACATGTTGCCTCCCACAAAGCTTCCATCAAGCTTGACCCAGTTGAACAAATTGAAGGTCTTTCATATGTATGAATCAAACTTGGTGGGGGAAATCCCAGAAACCATTGGAGACATGGTGGCATTGGAGAATTTGGATTTGTCAAAGAATGGTTTAAGTGGACAAATTCCCAATGGTTTGTTCATGCTGAAAAATCTGAGCATAGTATATATTTACAAGAACAGACTCTCAGGGGATATACCTGGAGTGGTTGAAGCATTCAATTTGACAGAACTTGATCTTTCAGAAAATAATCTTAGTGGGAAAATACCAGATGATTTGGGAAAGCTCAGCAAGTTAACATACTTGTGTTTGTCTATGAACAAATTATCAGGGAAGGTACCAGAAAGCATTGGTCTTCTACCATCTCTGACTGATTTTATTGTTTTTCTCAACAATTTATCAGGTACTCTTCCACCAGATTTCGGTAGAATCTCAAAGCTTGAAACTTTTCAGGTTGCATCTAATAGTTTCACAGGAAGATTGCCAAAGAACTTGTGCTACCATGGAAGGTTAGTTGGTTTAACTGCTTATGACAATAACCTGAGTGGGGAGTTGCCAGAATCTTTAGGAAGTTGCAGTAGCCTGCAATATCTGTGGGTTGAAAACAATGAGCTTTCTGGCAACATTCCTAGTGGTCTATGGACTTTGAATTTATCAAGCATTATGATAAATGAAAACAAGTTCACTGGTCAGCTTCCTGAAAGATTGCTTGAGAATATTTCAGAGCTGAGGATAAGTTACAATCAGTTTTCTGGTAGAATTCCACTTGGAGTGTCTTCTTGGAAGAATATTGTGGTGTTCAATGCCAGTCACAACCTATTCAATGGTAGTATTCCACTGGAGCTAACATCTCTTCCTCACCTAACAACTCTTCTGCTTGATCATAACCAGTTCACAGGACCACTTCCTTCAGATATAGTATCATGGAAGTCCCTAATAAATCTAGACTTACACCACAATCAACTCTCTGGAGAAATCCCACTTGCAATTGCTCAGTTGTCTGCTCTCAATATTTTGGATTTATCAGAAAACAGAATATCTGGCCAAATTCCACTTCAACTAGCTCTTATGAGACTCACAAATATCAATCTCTCCTCCAATAATTTGGTAGGAAGGATTCCAAGTGAATTTGAAAATCTTGTGTTTGCCAACAGCTTTTTGAACAATCCTGGTCTCTGTGCTGATACTGCAGTGCTGAACCTTATCTTGTGCAATTCCAAGCCACAAAGGGCAAGAATTGATAGAAGATCTGCATCTCATGTTATAATCATAAGCCTGGTGGTAGCAGCCTCCTTGCTGGCTTTGTTGTCATCATTTTTGATGATCAGAGTTTACAGAAAAAGAAAGCAAGAATTGAAAAGGTCATGGAAGCTGACTTCCTTTCAAAGGCTTAGTTTCACAAAAGCAAATATTGTGTCCTCCTCAATGTCAGAACACAATATTATTGGCAGTGGTGGGTTTGGTGCAGTATATCGTGTTGGTGTTGGTGATTCAAACTATGTTGCAGTGAAAAAGATACGCAGTAACAGAAAGTTAGAGGAGAAGCTTGTGAGTTCATTTCTTTCAGAAGTTGAAATTCTGAGCAATATTCGTCACAACAACATTGTGAAGTTGCTATGCTGCGTCTCCAAAGAGGATTCTCTTCTCCTTGTCTACGAGTATCTCGAAAACCATAGCCTTGATAGATGGCTGCACAACAAAAGTAAGCAGATAGCTCCAGGTTCAGTCCTTGATTGGCCAAAGAGATTACACATAGCCATTGGAGCAGCACAAGGTTTGTGCTATATGCATCATGACTGCTTGCCACCTGTTGTTCATCGCGATGTGAAAACAAGTAACATTCTGTTGGATTCTAAATTCAATGCAAAAGTTGCTGATTTTGGTCTGGCCATGATGTTGATGAAGCCAGAAGAACTTGCTACCATGTCAGCTGTGGCCGGCACATTTGGCTATATTGCTCCAGAATATGCTCAAACAACAAGAGTCAATGAGAAGATAGATGTCTATAGCTTTGGAGTTGTCCTACTGGAACTGACAACTGGAAAAGAAGCTAATCATGGAGATGAATACTCATCTCTGGCCGAATGGTCGTGGCGCCACATTGAGTTAGGGACAGATGTAGAAGATATTTTGGATAAAGAAATTAAGGAAGCTTGTTACATGGATGAAATCTGCAACATCTTCAAACTTGGGGTCATGTGCACTGCAACACTGCCAGCTAGTAGACCTTCCATGAAGGAAGTCCTGAAAATTTTGCTCAACTGCAGCAATTCACTCACCATTGGAGAGAAGAATGCTGGTATCTACGATTCAGTTCCACTTCTTAAGAATTCAAAATGGGAAAATCAGGTGGAGTATTATACTGATGATGATTGA 3033 0.4045 MKKITSSCVKMPILPLLSFLFLIFAHSQSHSLLYDQEHAVLLKIKQYLQNPPFLHHWIPSNSSHCTWPEIRCTNGSVTSLTMFNTNITQTLPPFLCDLKSLTHIDFQLNFIPGEFPTSLYNCSKLEYLDLSQNIFVGKIPDDIHHLASLSFLSLGGNNFSGDIPASIGRLKELRSLYLHQCLFNGTFPAEIGNLSNLELLHAFSNHMLPPTKLPSSLTQLNKLKVFHMYESNLVGEIPETIGDMVALENLDLSKNGLSGQIPNGLFMLKNLSIVYIYKNRLSGDIPGVVEAFNLTELDLSENNLSGKIPDDLGKLSKLTYLCLSMNKLSGKVPESIGLLPSLTDFIVFLNNLSGTLPPDFGRISKLETFQVASNSFTGRLPKNLCYHGRLVGLTAYDNNLSGELPESLGSCSSLQYLWVENNELSGNIPSGLWTLNLSSIMINENKFTGQLPERLLENISELRISYNQFSGRIPLGVSSWKNIVVFNASHNLFNGSIPLELTSLPHLTTLLLDHNQFTGPLPSDIVSWKSLINLDLHHNQLSGEIPLAIAQLSALNILDLSENRISGQIPLQLALMRLTNINLSSNNLVGRIPSEFENLVFANSFLNNPGLCADTAVLNLILCNSKPQRARIDRRSASHVIIISLVVAASLLALLSSFLMIRVYRKRKQELKRSWKLTSFQRLSFTKANIVSSSMSEHNIIGSGGFGAVYRVGVGDSNYVAVKKIRSNRKLEEKLVSSFLSEVEILSNIRHNNIVKLLCCVSKEDSLLLVYEYLENHSLDRWLHNKSKQIAPGSVLDWPKRLHIAIGAAQGLCYMHHDCLPPVVHRDVKTSNILLDSKFNAKVADFGLAMMLMKPEELATMSAVAGTFGYIAPEYAQTTRVNEKIDVYSFGVVLLELTTGKEANHGDEYSSLAEWSWRHIELGTDVEDILDKEIKEACYMDEICNIFKLGVMCTATLPASRPSMKEVLKILLNCSNSLTIGEKNAGIYDSVPLLKNSKWENQVEYYTDDD* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02284 1010 ProSiteProfiles Leucine-rich repeat profile. 293 316 IPR001611 GO:0005515
Phac4g02284 1010 PRINTS Leucine-rich repeat signature 294 307 - -
Phac4g02284 1010 PRINTS Leucine-rich repeat signature 552 565 - -
Phac4g02284 1010 Gene3D Transferase(Phosphotransferase) domain 1 774 987 - -
Phac4g02284 1010 SUPERFAMILY L domain-like 42 343 - -
Phac4g02284 1010 SUPERFAMILY Protein kinase-like (PK-like) 673 971 IPR011009 -
Phac4g02284 1010 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 17 966 - -
Phac4g02284 1010 FunFam Kinase family with leucine-rich repeat domain-containing protein 774 986 - -
Phac4g02284 1010 SMART serkin_6 695 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02284 1010 Gene3D Ribonuclease Inhibitor 212 344 IPR032675 -
Phac4g02284 1010 Gene3D Ribonuclease Inhibitor 345 619 IPR032675 -
Phac4g02284 1010 Pfam Leucine Rich Repeat 124 146 IPR001611 GO:0005515
Phac4g02284 1010 Pfam Leucine Rich Repeat 293 315 IPR001611 GO:0005515
Phac4g02284 1010 Gene3D Ribonuclease Inhibitor 146 211 IPR032675 -
Phac4g02284 1010 Pfam Leucine rich repeat N-terminal domain 36 72 IPR013210 -
Phac4g02284 1010 SUPERFAMILY RNI-like 292 599 - -
Phac4g02284 1010 FunFam Receptor-like protein kinase HSL1 isoform A 34 185 - -
Phac4g02284 1010 Pfam Protein kinase domain 697 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02284 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 823 835 IPR008271 GO:0004672|GO:0006468
Phac4g02284 1010 Gene3D Ribonuclease Inhibitor 36 145 IPR032675 -
Phac4g02284 1010 SMART LRR_typ_2 293 315 IPR003591 -
Phac4g02284 1010 SMART LRR_typ_2 244 268 IPR003591 -
Phac4g02284 1010 SMART LRR_typ_2 552 576 IPR003591 -
Phac4g02284 1010 SMART LRR_typ_2 146 170 IPR003591 -
Phac4g02284 1010 SMART LRR_typ_2 504 528 IPR003591 -
Phac4g02284 1010 ProSitePatterns Protein kinases ATP-binding region signature. 701 724 IPR017441 GO:0005524
Phac4g02284 1010 Gene3D Phosphorylase Kinase; domain 1 664 773 - -
Phac4g02284 1010 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 190 290 - -
Phac4g02284 1010 FunFam Receptor-like protein kinase HSL1 isoform A 298 623 - -
Phac4g02284 1010 ProSiteProfiles Protein kinase domain profile. 695 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02284 Phac-Chr4 48880171 48884351 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02284 37 1010 Receptor kinase-like Gene Family AT5G25930 50.254 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac4g02284 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02284 - - gmx:100785907 1673.68