Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02282 ATGCATATATTGAGTGTTCAGTCCAAGTTTAAAGTAAAAAAAAGTCTCAAGCAGAGTAGACTGAGTCTTCTTTCTCTTCCTTTGCAAATCAACTCAAAAAAACCACTACACAAACACATGACAATACCCTTTTACTACTATTTAACCATCTTCTTATTCCTGAGCTGTGTACACTCTCAGACTCAGCTGCAATATCAAGAACATGCAGTTCTTCTGCGTATAAAGCAGCACCTGCAAAACCCTTCATTCCTCACTCACTGGACCCCTTCAAACACTCCTCACTGCTCTTGGCCAGAGATAACATGCACCAGTGACTCTGTCACTGGTTTAACTCTGTTCAACAGTGGAATCCATCAAACACTACCCAATTTCCTGTGTGACCTCAAAAATCTCACACATGTTAATTTCAGCACTAACTCCATTCCGGGGGAGTTCCCAACATTTCTCTATAAATGTTCCAAGCTGGTGTCCCTTGACCTTGAAGGGAATGAGTTCACTGGTAGCATTCCTAATGACATAGACAAGTTGGTTAACTTGCAGCATCTTAACCTTGGTTCCACCAACCTCAATGGTGATATTCCCTCAAGCATTGGAAGGCTAAAGCATTTGAGAGTTCTTCAACTTCACTATTGTCTATTTAATGGCTCTTTTCCCGATGAGAGTATTGCCAACTTGTTCAATCTTGAATTCTTGGACATGTCCTCTAACTTGGTGCTCCCTCCTTCCAAGTTCCCATCAGGCCTGACCCAGTTGAAAAAACTGAAGTTCTTTCACATGTACAGTTCCAACCTCTTCGGGGAAATCCCTGAAACCATTGGAGAAATGGTGGCTTTGGAGAACTTGGATTTGTCACGAAGCAATTTCAGTGGAGAAATTCCCAAAGGCTTGTTCATGCTCAGGAATTTGAGCATACTCTACCTTTACAGTAACAGTCTCTCTGGGGAGATACCCGGTGAGATTGAAGCATTGAATTTGACAGACCTCGATCTTGCACAGAACAATCTTTCAGGGAAAATACCTCAAGATTTTGGGAAGCTGCAAAAATTAAGATGGTTAAGTTTGTCTCTCAATAACTTGTCAGGGGAGATTCCACAAAGCTTAGGCCGTCTTGCATCTCTAGTACATTTTCATATCATGTTCAATAACTTGTCAGGTATTCTTCCTCCTGATTTTGGTGGCTACTCTGAGCTTAAAACATTTCTGGTTGCAAAAAATAGTTTCAGTGGAAAGCTCCCGGAGAACTTATGCTATCATGGTCAGTTACTTAATTTATCTGCTTATTGTAATCATCTGAATGGGGAGTTACCAGAATCACTTGGCCAGTGCAGTAGTTTGATGGATTTAAAAATTTATAGTAATGAGTTTTCTGGTAGCATTCCTAGTGGTCTTTGGACTTTCAATTTGTCAAATTTCATGGTGAGCCATAATAAGTTCAGTGGTGAGCTTCCTGAGAGATTGTCCTCAAGTATTTCAAGATTGGAGATAGATTACAATCAGTTTTATGGTAGGATTCCAACAGGGGTGTCTTCATGGACTAATGTGGTTGTGTTTAAAGCCAGTGAGAACTACCTCAATGGTAGTGTTCCAAAGGAGTTAACAAATCTTCCCAAGCTAACAACTCTTTTGCTTGATCATAACCAGCTCACAGGGCCACTTCCATCAGATATAATATCATGGAAGTCCCTGGTGAGTCTAAATTTGAGCCATAACCAACTCTATGGGAAAATCCCAGATGGAATTGGTTATTTACCTGTCCTCAATCAACTTGACCTGTCAGAAAACCAATTCTCAGGTCAAGTTCCTTCAGTTCTTCCTAGACTCACAAATCTCAACTTGTCATCTAATCATTTTACAGGGAGAGTTCCAAATGAGTTTGAAAATTCTGTGTATTCTGAGAGCTTTTTGAATAATTCTGGCCTCTGTGCTGATACCCCAGTACTGAACCTAAGGCTGTGCAATGTTGGAGTTGAAAAGACAACCAAAGGCTCTTCTTGGTCTCTTGCTTTGATTCTGTGTCTGGTGGCAGTAACCCTTTTGTTGGCTTTGTTGATATCACTCTTGATTATCAAACTTTTCAGAAGAAGGAAACATGGATTGGATAACTCATGGAAGCTCATTTCCTTTCAAAGGCTGAGTTTCACTGAATCAAACATAGTTTCATCAATGACAGAACACAATGTTATTGGAAGTGGTGGATTTGGCACAGTATACCGTATCCCTGTTGATGGTTTAGACCATATTGCTGTCAAGAAGATCTGCAGTAACAGAAAGTTAGACAGAAAGCTAGAGAGCTCATTTCGTGCAGAAGTGAAAATATTGAGCAACATTCGTCATAAAAACATTGTGAAGTTGTTGTGTTGCATCTCCAATGAGAACTCTATGCTCCTTGTGTATGAGTATTTGGAAAACCGTAGCCTAGATAGGTGGCTGCACAATAAGGGCAAGTCATCAACTGTGTCAGTTTCAGTGGATCATTTTGTGCTTGATTGGCCAAAGAGATTGAAAATAGCCATTGGGGTGGCTCATGGTTTGTGCTACATGCACCATGATTGCTTCCCACCGATTGTTCATAGAGATGTGAAAACAAGCAACATCCTTTTGGATGCTCAATTCAATGCAAAAGTAGCTGATTTTGGTCTGGCTAGGATGTTAATGAAGCCAGGGGATCTTGCTACCATGTCTTCTGTTGTTGGCTCATTTGGCTACATGGCTCCAGAATATGTTCAAACAACACGAGTTAGTGAGAAGATTGATGTGTTCAGCTTTGGAGTTGTACTACTGGAGCTGACAACTGGTAAAGAAGCTAACTATGGTGATGAGCACTCTTCTCTTGCAGAGTGGTCATGGCGCCACATAATTGTAGGAAGCAAAATAGAAGAGCTGCTAGACAATGATTTCATGGATCCAAGTTACACAAATGAAATGTGCAGTGTTTTCAAACTTGGGGTCTTGTGCACTTCAACACTTCCTGCTAATAGGCCTTCCATGAAAGAGGTGCTACACATATTGGTCACCATAAGAGAAGGTTTTGCTTTTGGAGAGGGGAATGTTAGGCAATGTGATGGTGTTCCCCTTCTTAAGAATTCTAGATGGGAGAGTAGGTTGGATGATGCTAGTGATAATGATAGTGATTAG 3135 0.4077 MHILSVQSKFKVKKSLKQSRLSLLSLPLQINSKKPLHKHMTIPFYYYLTIFLFLSCVHSQTQLQYQEHAVLLRIKQHLQNPSFLTHWTPSNTPHCSWPEITCTSDSVTGLTLFNSGIHQTLPNFLCDLKNLTHVNFSTNSIPGEFPTFLYKCSKLVSLDLEGNEFTGSIPNDIDKLVNLQHLNLGSTNLNGDIPSSIGRLKHLRVLQLHYCLFNGSFPDESIANLFNLEFLDMSSNLVLPPSKFPSGLTQLKKLKFFHMYSSNLFGEIPETIGEMVALENLDLSRSNFSGEIPKGLFMLRNLSILYLYSNSLSGEIPGEIEALNLTDLDLAQNNLSGKIPQDFGKLQKLRWLSLSLNNLSGEIPQSLGRLASLVHFHIMFNNLSGILPPDFGGYSELKTFLVAKNSFSGKLPENLCYHGQLLNLSAYCNHLNGELPESLGQCSSLMDLKIYSNEFSGSIPSGLWTFNLSNFMVSHNKFSGELPERLSSSISRLEIDYNQFYGRIPTGVSSWTNVVVFKASENYLNGSVPKELTNLPKLTTLLLDHNQLTGPLPSDIISWKSLVSLNLSHNQLYGKIPDGIGYLPVLNQLDLSENQFSGQVPSVLPRLTNLNLSSNHFTGRVPNEFENSVYSESFLNNSGLCADTPVLNLRLCNVGVEKTTKGSSWSLALILCLVAVTLLLALLISLLIIKLFRRRKHGLDNSWKLISFQRLSFTESNIVSSMTEHNVIGSGGFGTVYRIPVDGLDHIAVKKICSNRKLDRKLESSFRAEVKILSNIRHKNIVKLLCCISNENSMLLVYEYLENRSLDRWLHNKGKSSTVSVSVDHFVLDWPKRLKIAIGVAHGLCYMHHDCFPPIVHRDVKTSNILLDAQFNAKVADFGLARMLMKPGDLATMSSVVGSFGYMAPEYVQTTRVSEKIDVFSFGVVLLELTTGKEANYGDEHSSLAEWSWRHIIVGSKIEELLDNDFMDPSYTNEMCSVFKLGVLCTSTLPANRPSMKEVLHILVTIREGFAFGEGNVRQCDGVPLLKNSRWESRLDDASDNDSD* 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02282 1044 Gene3D Ribonuclease Inhibitor 64 220 IPR032675 -
Phac4g02282 1044 Gene3D Ribonuclease Inhibitor 372 655 IPR032675 -
Phac4g02282 1044 FunFam Kinase family with leucine-rich repeat domain-containing protein 801 1018 - -
Phac4g02282 1044 Pfam Leucine Rich Repeat 154 176 IPR001611 GO:0005515
Phac4g02282 1044 Pfam Leucine Rich Repeat 324 346 IPR001611 GO:0005515
Phac4g02282 1044 Pfam Leucine Rich Repeat 606 627 IPR001611 GO:0005515
Phac4g02282 1044 Pfam Leucine rich repeat N-terminal domain 67 102 IPR013210 -
Phac4g02282 1044 Pfam Protein kinase domain 724 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02282 1044 SUPERFAMILY Protein kinase-like (PK-like) 715 1003 IPR011009 -
Phac4g02282 1044 ProSitePatterns Protein kinases ATP-binding region signature. 728 751 IPR017441 GO:0005524
Phac4g02282 1044 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 321 998 - -
Phac4g02282 1044 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 223 321 - -
Phac4g02282 1044 Gene3D Ribonuclease Inhibitor 221 369 IPR032675 -
Phac4g02282 1044 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 64 222 - -
Phac4g02282 1044 FunFam Receptor-like protein kinase HSL1 isoform A 329 652 - -
Phac4g02282 1044 SMART LRR_typ_2 535 559 IPR003591 -
Phac4g02282 1044 SMART LRR_typ_2 560 583 IPR003591 -
Phac4g02282 1044 SMART LRR_typ_2 299 323 IPR003591 -
Phac4g02282 1044 SMART LRR_typ_2 604 627 IPR003591 -
Phac4g02282 1044 SMART LRR_typ_2 225 251 IPR003591 -
Phac4g02282 1044 SMART LRR_typ_2 346 370 IPR003591 -
Phac4g02282 1044 SMART LRR_typ_2 176 200 IPR003591 -
Phac4g02282 1044 SUPERFAMILY RNI-like 103 384 - -
Phac4g02282 1044 SUPERFAMILY RNI-like 324 626 - -
Phac4g02282 1044 SMART serkin_6 722 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02282 1044 ProSiteProfiles Protein kinase domain profile. 722 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02282 1044 Gene3D Transferase(Phosphotransferase) domain 1 801 1013 - -
Phac4g02282 1044 ProSitePatterns Serine/Threonine protein kinases active-site signature. 855 867 IPR008271 GO:0004672|GO:0006468
Phac4g02282 1044 Gene3D Phosphorylase Kinase; domain 1 699 800 - -
Phac4g02282 1044 FunFam Kinase family with leucine-rich repeat domain-containing protein 704 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02282 Phac-Chr4 48865064 48869134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02282 64 1037 Receptor kinase-like Gene Family AT5G25930 48.682 0.0 903
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac4g02282 Pkinase 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02282 - - gmx:100819744 1616.67