Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02257 ATGGGTTGCATTTACTCGCGAGTCTGCATAGGCGACAACTGCAGAGGCTCCAGCATCAACGGCGACCCCATTAACAGAACCACCGACGTAGGTGAAGTCGCCAATTTCTCACACTCCTCTTCCGACGTCGAAGAAGGCGAAATCAGAGACCAGCTCAACCAATTGAGCATCACGCGAGACTCCGAAACCGGAATCCGGAGACTATCTAGGGTTTCAGCGCAGTTTCTGCCGCCGGATGGTTCGCGAATCGTGAAAGTACCTTCTGGAAACTTCGAATTGCGATACTCCTTCTTGTCTCAGCGAGGGTACTACCCCGATGCACTCGATAAAGCTAACCAGGACAGTTTCTGCATCCACACGCCTTTTGGTACGAACCCTAACGATCACTTTTTTGGAGTGTTCGACGGGCATGGTGAGTTTGGAGCTCAGTGCTCGCAGTTCGCGAAGCGGAAAGTGTGTGAGAATTTGCTCAGAAACTCCAAATTCCGTGGTGATCCTGTTGAGGCTTGTCATGCGGCGTTTTTGGCGACGAATTCGCAGCTTCATGCTGATGTTTTGGATGACAGCATGAGCGGGACGACGGCGATCACGGTGCTGGTGAGGGGGAGGACGATATATGTGGCGAATTCCGGCGATTCGAGGGCGGTGATTGCGGAGAGGAGAGGGAAGGAAATTGTGGCCGTTGATTTGTCAATTGATCAGACGCCGTTTAGGAATGATGAGCTTGAGAGAGTGAAGCTATGTGGGGCCAGGGTTCTTACTTTGGATCAGATTGAGGGGTTGAAGAACCCTGATGTGCAGTGTTGGGGCACTGAGGAGGGTGATGATGGTGACCCTCCGAGGTTGTGGGTGCCCAATGGGATGTACCCGGGGACGGCTTTCACCAGGAGTATTGGTGATTCTATTGCGGAGACTATTGGGGTTGTGGCGAATCCTGAGATTGTTGTGTTTGAGCTCACGCAGGATCACCCTTTCTTTGTGCTTGCTAGTGATGGGGTGTTTGAGTTTCTCTCTAGCCAGAGTGTGGTTGAAATGGTTGCAAAATTCAAAGATCCTCGTGATGCTTGCGCTGCAATTGTGGCAGAATCTTATCGACTCTGGCTGCAATATGAAACTCGTACAGATGACATCACAGTCATCATTGTACATTCTACTGTTGGTCAGAGTCAGTCGGCTAGTTATGGTGATGTTTTGCGAAAACCTGTGCCACAAGTTGTAGAGGTGACAGGTTCAGAATCCCCTTCCACCTTTGGCTGGAGTGCTAGAAACCATCGTGTAAGACATGATTTGTCAAGGGCACGCCTCCGAGCACTTGAAAATTCCCTAGAAAATGGGCAAGTTTGGGTTCCTCCCCCTTCAGCTCATAGAAAGACATGGGAAGAAGAAGCACACATAGAGCAGGCATTGCACGATCATTTTCTCTTCCGAAAACTTACTGATTCTCAGTGTCATGTTTTATTGGATTGCATGCAAAGAGTGGAGGTCGAACCTAGGGATATTATAGTCAAACAGGGTGGTGAAGGTGACTGTTTTTATGTTGTTGGTAGTGGAGAATTTGAGGTCTTGGCAACTCAGGAAGAAAAAGAAGGGGACGTACCTAGGGTTTTGCAGCGCTACACAGCTGAAAAACTCTCTTGTTTTGGAGAACTTGCTCTGATGTACAATAAACCACTCCAGGCTTCTGTACGTGCTGTAACAAAAGGAACTCTTTGGGCTTTAAAACGGGAAGATTTCCGTGGGATTTTAGTGTCAGAATTCTCTAACTTATCATCATTGAAGTTGCTTCGGTCTGTAGATCTCCTCTCGAGGTTATCAATTTTACAACTCAGCCAGATTTCTGACTCCCTTTCTGAAGTTTCCTTCTCAAATGGGCAGACAATAATAGACAATAATGAAATCCTTGCATTGTACATTATACAGAAGGGATGCGTAAAAATCACTTTTGATTCTGATTTATTGACGAGTCCAAATGCCTACAGCCTCAAGCCTGACATCCAAAACGAGGAGGATGATGTTCAGAGCATAACAGAACTATCAATAGAGAAGCCTGAGGGAAGCTATTTTGGTGAATGGGTCCTTTATGGTGAACGTATTGGTTCCATAAGTGCTGTTGCTGTGGGTGATGTTGTATGTGCTTTACTAACAAAGGACAAATTTGAATCTGTTATTGGCTCCTTACAAAAGATTTCTCAGGAAGATCACAAGTCAAGGGATAATTCCAAGGAGTTGACTAGTAGAAATTATGATTTTTCATCCCTTGATAAAGTCCAGCTCTCAGATTTGGAGTGGAGAAAGACACTATATTCCACTGACTGTTCTGAAATAGGGGTTGCAAATTTAAAAGAATCAGAGAATTTGCTTACTTTGAAGAGATTTTCTAAGCCAAAGGTGAAAAGGCTTGGGAAGGAATCGCAAGTCTTGAAAGAGAAAGATTTGATTAAGAGTTTGGGCTCTTCAACTAGTATACCACAGGTTTTATGCACTTGTGCTGATCGCATGTATGCTGGAATACTGCTAAATACTCGCCTTGCTTGCCCCTTGTCTTCCATACTTTCAAGTCCTTTTAGTGAATCAGCTGCACAGTTTTGTGCTGCATCTGTTGTTACTGCCTTAGAAGACTTGCACAAGAATGGTGTTCTCTACAGAGGTGTGTCACCTGATGTTTTGATGTTGGAGCAAACAGGACAGATACAGATGACATTGCGGTAA 2709 0.4563 MGCIYSRVCIGDNCRGSSINGDPINRTTDVGEVANFSHSSSDVEEGEIRDQLNQLSITRDSETGIRRLSRVSAQFLPPDGSRIVKVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTNPNDHFFGVFDGHGEFGAQCSQFAKRKVCENLLRNSKFRGDPVEACHAAFLATNSQLHADVLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERRGKEIVAVDLSIDQTPFRNDELERVKLCGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVFELTQDHPFFVLASDGVFEFLSSQSVVEMVAKFKDPRDACAAIVAESYRLWLQYETRTDDITVIIVHSTVGQSQSASYGDVLRKPVPQVVEVTGSESPSTFGWSARNHRVRHDLSRARLRALENSLENGQVWVPPPSAHRKTWEEEAHIEQALHDHFLFRKLTDSQCHVLLDCMQRVEVEPRDIIVKQGGEGDCFYVVGSGEFEVLATQEEKEGDVPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTKGTLWALKREDFRGILVSEFSNLSSLKLLRSVDLLSRLSILQLSQISDSLSEVSFSNGQTIIDNNEILALYIIQKGCVKITFDSDLLTSPNAYSLKPDIQNEEDDVQSITELSIEKPEGSYFGEWVLYGERIGSISAVAVGDVVCALLTKDKFESVIGSLQKISQEDHKSRDNSKELTSRNYDFSSLDKVQLSDLEWRKTLYSTDCSEIGVANLKESENLLTLKRFSKPKVKRLGKESQVLKEKDLIKSLGSSTSIPQVLCTCADRMYAGILLNTRLACPLSSILSSPFSESAAQFCAASVVTALEDLHKNGVLYRGVSPDVLMLEQTGQIQMTLR* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02257 902 Pfam Cyclic nucleotide-binding domain 493 582 IPR000595 -
Phac4g02257 902 Pfam Protein phosphatase 2C 121 363 IPR001932 -
Phac4g02257 902 Gene3D Jelly Rolls 445 582 IPR014710 -
Phac4g02257 902 ProSiteProfiles Protein kinase domain profile. 761 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02257 902 CDD CAP_ED 474 582 IPR000595 -
Phac4g02257 902 ProSiteProfiles cAMP/cGMP binding motif profile. 474 582 IPR000595 -
Phac4g02257 902 PRINTS cAMP-dependent protein kinase signature 495 509 - -
Phac4g02257 902 PRINTS cAMP-dependent protein kinase signature 545 554 - -
Phac4g02257 902 PRINTS cAMP-dependent protein kinase signature 510 524 - -
Phac4g02257 902 PRINTS cAMP-dependent protein kinase signature 719 731 - -
Phac4g02257 902 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Phac4g02257 902 Gene3D Phosphorylase Kinase; domain 1 759 845 - -
Phac4g02257 902 ProSiteProfiles cAMP/cGMP binding motif profile. 600 740 IPR000595 -
Phac4g02257 902 SMART cnmp_10 600 738 IPR000595 -
Phac4g02257 902 SMART cnmp_10 474 597 IPR000595 -
Phac4g02257 902 CDD PP2Cc 110 383 IPR001932 -
Phac4g02257 902 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 460 900 - -
Phac4g02257 902 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 448 588 - -
Phac4g02257 902 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 89 386 - -
Phac4g02257 902 SMART PP2C_4 90 382 IPR001932 -
Phac4g02257 902 SUPERFAMILY cAMP-binding domain-like 591 731 IPR018490 -
Phac4g02257 902 Gene3D Transferase(Phosphotransferase) domain 1 846 900 - -
Phac4g02257 902 Gene3D - 89 384 IPR036457 -
Phac4g02257 902 SUPERFAMILY cAMP-binding domain-like 455 583 IPR018490 -
Phac4g02257 902 SUPERFAMILY PP2C-like 82 383 IPR036457 -
Phac4g02257 902 SUPERFAMILY Protein kinase-like (PK-like) 765 898 IPR011009 -
Phac4g02257 902 Gene3D Jelly Rolls 587 744 IPR014710 -
Phac4g02257 902 CDD CAP_ED 600 724 IPR000595 -
Phac4g02257 902 ProSiteProfiles PPM-type phosphatase domain profile. 94 384 IPR001932 -
Phac4g02257 902 FunFam Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 590 739 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02257 Phac-Chr4 48418551 48426501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02257 1 899 PP2C-type Phosphatase Gene Family AT2G20050 68.501 0.0 1267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Phac4g02257 PP2C 4e-35 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02257 - - gmx:100799821 1618.21