Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02253 ATGGCTTCTTCAATTCGTCCCTCGCTTTCTTCCTTCATGTTACCCTCCTTCTCTTCTTGCAACCCTTCTCAAAAACTCTCTCTTTTTCATCTGGGTAGCGGTATTAGACGGTTACATAATTTTGGCTTGAAAGCTTCTAAGTTTTTGAGACATGATGATGATAACTGCATGACAGCGAAGGCATCTATAAACACGTCCTCAGCTGCTGCACAGGAAAATGCACTGGATTGGATCAAACATGACAAGAGAAGAATGCTTCATGCTGTGTATCGTGTTGGGGACTTAGACAAGACCATAAAATTTTATAAAGAGTGTCTCGGAATGAAGTTGCTCAGAAAGCGTGACATGCCAGACCAGAGACATACTAATGCCTTTCTTGGATATGGGCCTGAGGATGCTCACTTTGCTGTTGAACTGACATACAATTATGGGATTGACAAGTATGACATTGGAGATGGATTTGGTCATTTTGGTCTTGCTTTTGATGATATTTCAAGAATAGTGGAACTTGTCAGAGCTAAGGGTGGCAAAATTACTAGAGAGCCTATGCTTGTCAAGGGAAGCAACTCAGTAATTGCATATATTGAAGATCCTGATGGTTATCAATTTGAACTTTTGGAAAGGGCTCCCTCTCCGGAGCCTTTGTACAAAGTAATGCTTCGAGTTGGTGATCTTGACCGTTCCATCAAATTTTATCAGAAGGCTTTTGGCATGGAGCTACTTCGAACACAAGATGATCCAGAATCCCAGAACACAACAGCAATAGTGGGATATGGTACAGAGGAAAAAAGTGCTGTACTGGAGTTGACTTACAACTATGGAATCACAGAATATGATAAAGGAGATGCTTATGCTCAGATTGCAATTGTTACAGATGATGTGTACAAAACTGCAGAAGCAATTAAACTTGCTGGTGGGAAGATTATTCGGGAACCAGGACCAATACCTGACACAAAGATAAAGATCACATCATGTGTGGATCCTGATGGTTGGAAAACTGTTTTTGTAGATAATATTGACTTTAAGAAGGAGTTGGAGATCAAAATTTGA 1050 0.4038 MASSIRPSLSSFMLPSFSSCNPSQKLSLFHLGSGIRRLHNFGLKASKFLRHDDDNCMTAKASINTSSAAAQENALDWIKHDKRRMLHAVYRVGDLDKTIKFYKECLGMKLLRKRDMPDQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDISRIVELVRAKGGKITREPMLVKGSNSVIAYIEDPDGYQFELLERAPSPEPLYKVMLRVGDLDRSIKFYQKAFGMELLRTQDDPESQNTTAIVGYGTEEKSAVLELTYNYGITEYDKGDAYAQIAIVTDDVYKTAEAIKLAGGKIIREPGPIPDTKIKITSCVDPDGWKTVFVDNIDFKKELEIKI* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02253 349 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 214 338 IPR037523 -
Phac4g02253 349 CDD GlxI_Ni 85 206 - -
Phac4g02253 349 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 84 208 IPR037523 -
Phac4g02253 349 NCBIfam lactoylglutathione lyase 84 209 IPR004361 GO:0004462|GO:0046872
Phac4g02253 349 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 218 338 IPR029068 -
Phac4g02253 349 Gene3D - 56 210 IPR029068 -
Phac4g02253 349 Gene3D - 211 349 IPR029068 -
Phac4g02253 349 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Phac4g02253 349 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 218 332 IPR004360 -
Phac4g02253 349 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 85 205 IPR004360 -
Phac4g02253 349 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 84 210 IPR029068 -
Phac4g02253 349 PANTHER LACTOYLGLUTATHIONE LYASE 64 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02253 Phac-Chr4 48400344 48404164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02253 215 335 Calmodulin-binding Proteins AT1G08110 27.703 2.11e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02253 K01759 - gmx:100781439 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac4g02253 4 48400344 48404164 Phac4g02253 4 48400344 48404164 ECH
Phac2g04667 2 43878570 43883144 Phac4g02253 4 48400344 48404164 PCT