Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02250 ATGGAGCGCATCATCGGCGCCAAGTTCAAGCTAGGTCGCAAGATCGGAAGCGGATCCTTCGGCGAAATCTACCTCGCCACGCATATTGATACCTTCGAAATCGTCGCGGTCAAGATCGAGAACAGTAAAGCGAAGCATCCGCAATTGCTTTACGAGGCCAAGCTCTACAATATTCTTCAAGGAGGAAGTGGCATCCCGAGCATAAAATGGTGTGGTGTAGACGGAGAGGATAATGTGCTTGTTATGGATTTGCTGGGACCTAGTCTTGAGGATCTTTTTGTTTACTGTGGAAGAAAGTTCTCCCTCAAAACCGTGTTGATGTTAGCTGATCAAATGTTGACTAGAATTGAATATGTGCATTCTAAAGGATACCTACACAGGGATATAAAACCTGACAACTTTCTCATGGGACTTGGTCGTAAGGCAAACCAGGTTTACATAATTGATTTTGGGCTTGCAAAACGATATAGGGACACCGCAACTAATCGCCACATTCCTTACAGGGAAAACAAAAACTTAACAGGGACTGCACGCTATGCAAGTTGCAATACTCATCTTGGGATTGAGCAAAGTCGACGGGATGATTTGGAATCACTTGGATACGTGCTTCTGTATTTTCTCAGAGGAAGCCTTCCTTGGCAAAACCTAAAGGCTGCAACAAAGAAGCAAAAGTATGATAAAATATGTGAGAAGAAACTAGGAACTCCTATTGAGGTTTTATGCAAAACTCATCCTGTTGAGTTTGCTTCATACTTTCATTATATTCACTCTCTGACATTTGATCAGCGACCTGATTATGGATTCTTGAAGCGCCTAATTCGGGATCGATTTGCTCGAGAAGGTTATGAATTTGATTATGTATTTGATTGGACTATTTTAAAGTACCAGCAGGCACAAAAGAATAGAGTCCAGCCTCGCATGTCTACGGTCCCTGGAGCAAGCATCAGTCCTGCAATGCCAATGGATGTGGACAACAATCGAGGGGATGTCTCAGCCGAACGCATTAAATCAGGCAATGTAACTGGTTCCGGTGTTAAAATTCAATTTAAATCATCTGGGATAAAAAATTTGGGTTCTGAAAAGCCTCTTGACAAGAATATTTTTGGTGAAGCACATATACCCTCTACCTCATACTCTCTTGCTGGCACCTCAAAAAGGAACTCTTTGAAGCCTGCCTTGTCCACTGAAGCTGCCAACCCGGTAAATGGGCAAGGAAGTAATAAAATTGGCCCTTCAAGTAGCTGGATTTCATCTGTGCAACGCAAATCTTCTGCCAAATGA 1281 0.4286 MERIIGAKFKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENSKAKHPQLLYEAKLYNILQGGSGIPSIKWCGVDGEDNVLVMDLLGPSLEDLFVYCGRKFSLKTVLMLADQMLTRIEYVHSKGYLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDTATNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQNLKAATKKQKYDKICEKKLGTPIEVLCKTHPVEFASYFHYIHSLTFDQRPDYGFLKRLIRDRFAREGYEFDYVFDWTILKYQQAQKNRVQPRMSTVPGASISPAMPMDVDNNRGDVSAERIKSGNVTGSGVKIQFKSSGIKNLGSEKPLDKNIFGEAHIPSTSYSLAGTSKRNSLKPALSTEAANPVNGQGSNKIGPSSSWISSVQRKSSAK* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02250 426 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Phac4g02250 426 MobiDBLite consensus disorder prediction 379 426 - -
Phac4g02250 426 FunFam Casein kinase I isoform delta-like 1 340 - -
Phac4g02250 426 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02250 426 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Phac4g02250 426 Gene3D Transferase(Phosphotransferase) domain 1 1 323 - -
Phac4g02250 426 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02250 426 PANTHER CASEIN KINASE-RELATED 13 330 - -
Phac4g02250 426 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02250 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02250 Phac-Chr4 48388644 48394002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02250 8 213 MAP Kinase Kinase Kinase AT1G54960 28.054 2.88e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Phac4g02250 Pkinase 1.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02250 K08960 - gmx:100805890 794.653