Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02221 ATGAATAGAGGTGTTCTTCAGAGCTCACCAGTGCAACAAATGATCACTGGAAACCCTAACTGGTGGAACATCAATATCAATAGCATGCCTCCTCAAGCTCCTCCTTTCTTCTCCACCACTCCTTCAAACTTTCCCATCCCTTATGCTCCCACTTCTCTTCCCTTTCCTTCTTGGAATGAGAATCAAGAGCTTCCTGAGTCATGGAGCCAGCTACTCATGAGTGGGGTGGTGGATGAACAAGGTAAGGTTGGGATGGGCCAGTTTCAGAGCAAGAAGTTGGAGAACTGGGAGGATCAAATGCTAGCTCAGGCTCCAAACGCTTCTCTTGTTGATGTTAAACAAGAAAATTCAGCTAACAGCTACGTATATGGCCATGGAAACGAAGAGCTTCAGTCATCAAAACCATCTTGGTCTCCAAAATCATGTGTCACAAGTTTCAGTAGCAACATGTTAGATTTCTCTAACAGCAACACAGATGCAAGGCATCCACCACCAGATCGATCTTCTGAGTGCAATAGCAGTGCAGCTGGTGGGGCACTGAAGAAAGCTAGGGTTCAACCCTCTGGCACAACACAGGCCACATTCAAGGTCAGGAAGGAGAAGTTAGGTGACAGAATTACTGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAGACTGACACAGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGAGCGGTGGACCAGGGAATGGGAGGCAGCAGAATTCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACCCTGGTCAGCTGCTGAATGAGAACTGCTTGAAAAGGAAAGCAGCAGGAGAACCGGATACTCAGGAAGAACAACAGAAGGGGCTGAGGAGTAGAGGGTTGTGTCTGGTTCCTGTGTCATGCACACTGCAAGTTGGGAGTGACAATGGAGCAGACTATTGGGCCCCTGCCCTAGGAGGGGGCTTTCGTTAG 1002 0.477 MNRGVLQSSPVQQMITGNPNWWNININSMPPQAPPFFSTTPSNFPIPYAPTSLPFPSWNENQELPESWSQLLMSGVVDEQGKVGMGQFQSKKLENWEDQMLAQAPNASLVDVKQENSANSYVYGHGNEELQSSKPSWSPKSCVTSFSSNMLDFSNSNTDARHPPPDRSSECNSSAAGGALKKARVQPSGTTQATFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLSGGPGNGRQQNSVQGEKNCIFPEDPGQLLNENCLKRKAAGEPDTQEEQQKGLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02221 333 MobiDBLite consensus disorder prediction 153 175 - -
Phac4g02221 333 MobiDBLite consensus disorder prediction 153 191 - -
Phac4g02221 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 246 IPR036638 GO:0046983
Phac4g02221 333 Gene3D - 191 245 IPR036638 GO:0046983
Phac4g02221 333 FunFam transcription factor bHLH68 isoform X1 193 246 - -
Phac4g02221 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 186 235 IPR011598 GO:0046983
Phac4g02221 333 CDD bHLH_AtbHLH_like 194 243 IPR045239 -
Phac4g02221 333 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 82 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02221 Phac-Chr4 48103024 48107910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02221 1 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.602 3.05e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02221 - - gmx:100786555 607.446