Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02205 ATGCCGTTCCACTGCGCCGGCTCACCGGCCACAACGATATCGTTACGGATGTTGTTCTATTTTCTCACGGTGGGCATGCAATCTCGGCGTCCCTTCCTCTTGTCATGGGTCCGCCTAAGTCTGGGATGGCTTGGTCAAGTTCCTGCTCACTATGCCCTTTGGTTTGGATGTCCTCATCACTTCAACGATACGGTCATCGTGTCCGGTGGCCACGATAATACTCTGAGAGTCTGGAACGCTTCCGGAAAGTGTATCTCAGTCATACAGAACGACACTGAAGACTCACATTTTGACTGGATCATCTCATGCGTTCACTTCGATCCCACGTCGGTGACGCCAAGACTTCTCACAGCGGCATGGGACGGGACAGTCAAATGCTGGGATTTGAACATAGTTACTAAAGCCTTGATAAAAAGATTTTCCACCGCCGGCCACCCCGGTGGCGTTAATGCCATGGCTATTCGTCGCCGGAGCGAACCTATTTTCGCCACCGGCGGTATTGATGGAGTCGTTATATGTTGGAGGCTGGAAGATGGTGTTAGGGCTTGTGAGATTCCAGTGGGATCACCCATCAGAATGAGAATGCAATCATATTGA 597 0.5109 MPFHCAGSPATTISLRMLFYFLTVGMQSRRPFLLSWVRLSLGWLGQVPAHYALWFGCPHHFNDTVIVSGGHDNTLRVWNASGKCISVIQNDTEDSHFDWIISCVHFDPTSVTPRLLTAAWDGTVKCWDLNIVTKALIKRFSTAGHPGGVNAMAIRRRSEPIFATGGIDGVVICWRLEDGVRACEIPVGSPIRMRMQSY* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02205 198 ProSiteProfiles Trp-Asp (WD) repeats profile. 62 79 IPR001680 GO:0005515
Phac4g02205 198 SMART WD40_4 81 128 IPR001680 GO:0005515
Phac4g02205 198 SMART WD40_4 40 79 IPR001680 GO:0005515
Phac4g02205 198 SMART WD40_4 133 175 IPR001680 GO:0005515
Phac4g02205 198 Pfam WD domain, G-beta repeat 95 128 IPR001680 GO:0005515
Phac4g02205 198 Pfam WD domain, G-beta repeat 59 79 IPR001680 GO:0005515
Phac4g02205 198 PANTHER RECEPTOR FOR ACTIVATED PROTEIN KINASE C RACK1 64 191 IPR045223 GO:0043022|GO:0045182
Phac4g02205 198 SUPERFAMILY WD40 repeat-like 58 190 IPR036322 GO:0005515
Phac4g02205 198 Gene3D - 52 196 IPR015943 GO:0005515
Phac4g02205 198 PRINTS G protein beta WD-40 repeat signature 162 176 IPR020472 -
Phac4g02205 198 PRINTS G protein beta WD-40 repeat signature 115 129 IPR020472 -
Phac4g02205 198 PRINTS G protein beta WD-40 repeat signature 66 80 IPR020472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02205 Phac-Chr4 48045190 48046970 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02205 63 173 Eukaryotic Initiation Factors Gene Family AT2G46290 33.628 1.94e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02205 - K05236 let:O77CONTIG1_04036 60.4622