Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02198 ATGGGTGAAGGCGAAGGAGGAGGTTGCGCTCCGAAGAATGCGTTGTCGTCGGAAGTTGTTGCGCCGGCGGTAGTGTCTACGGCGGCGCTGGAAGTTCCGGCGAGGAAGCTGGCGCGGCAGCTCGATTTCACGGGCGCGCCGGAGCATCCACAGCAGCAGCCGGTGGCGGTGTTGCCGTTGCCGCTGCAGGCGCCTCATGCAAGGGTTGGGAAACCAGAATCTCCAAAATCTAGATCAAGACCTAACTTTGAAATGAAAGATGCTACACCCAAGAAGCAAAAGCAGTGCAATTGTAAACACTCTAAATGCTTAAAGCTGTATTGTGAATGTTTTGCATCAGGAATATATTGTGATGGTTGCAACTGTGTAAATTGTTTCAACAATGTTGAAAATGAAGCTGCCAGAAGAGAAGCTGTTGAAGCTACCTTGGAGCGCAATCCAAATGCATTTAGGCCCAAAATTGCTAGTAGCCCACATGGAACACGTGATAGCAGGGAGGAGGCTGGGGAAGTTTTAATATTAGGAAAACATAACAAGGGGTGTCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGCGAATGCTTTCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAGGGAAGTGAAGAAAGGCAAGCTTTGTTTCATGGAGATCAAAATAACATGGCATATATTCAGCAAGCCGCAAACGCTGCCATAACTGGAGCTATTGGTTCCTCTGGTTATTCATCACCTCCGGTATCCAAGAAAAGAAAAGGTCAGGAACTCTTCTTTTGGCCTACAACCAAGGATCCATCCATTAGCAAGTTGGGACAACAGGTAAACAATGTCAGAGGTCCAGCACCTTCCTCATCTTTGTCACCTATCTCAGGCGCTCGTGTTGGAACTGCAACGTTAGGTCCTTCAAAATTTATGTACAGGTCTCTTTTAGCAGACATTATTCAACCACAGCACCTCAAGGAGCTATGCTCAGTTCTGGTGCTAGTATCAGGACAAGCTGCAAAGACACTTACAGACCAGAAAATTTTAATGGAAAAGCATGCAGAAGATCAGACAGAAACATCCCTTGCTTCGTCAAGTCAAGAACCATTACCACCAAATCAAAAGGAAGGCCATGTTGAGAAGACTGTGGCTGATGATTGTTCGAGTGCAAACCAAACAGATAAAATCAGCCCAGATGATTCCAGCTCCGATGGTGCTGATGTCCCAAAAGGGAGGCCTATGTCTCCTGGGACTTTAGCCTTGATGTGTGATGAGCAAGATACAATGTTCATGACAGCCGCCTCCCCCATTGGGCCAATGGCTCATGCTTGCAATACATCTTCTCAATTTCCTTATGGACAAGGAATGACAGAGGTCTATGCTGAGCAAGAAAGGATTGTATTAACAAAGTTTAGGGATTTTCTCAATAGGGTTATCACTATGGGAGAAATAAATGGCAAGTTAATACTTTCCTTTCCTCCTTTCCTTATAATTTTACTTTTGTTAACATTCTTAAAATCCCTTGGTGTTGGCTTTGGCAAGAAGACCGTCACCTTTCCATTGTGGCATTTAAATTATTATGTTTTACATGGCTGTCATTCCAAATGGTTCAGAAATTTCTGA 1632 0.4436 MGEGEGGGCAPKNALSSEVVAPAVVSTAALEVPARKLARQLDFTGAPEHPQQQPVAVLPLPLQAPHARVGKPESPKSRSRPNFEMKDATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNMAYIQQAANAAITGAIGSSGYSSPPVSKKRKGQELFFWPTTKDPSISKLGQQVNNVRGPAPSSSLSPISGARVGTATLGPSKFMYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLTDQKILMEKHAEDQTETSLASSSQEPLPPNQKEGHVEKTVADDCSSANQTDKISPDDSSSDGADVPKGRPMSPGTLALMCDEQDTMFMTAASPIGPMAHACNTSSQFPYGQGMTEVYAEQERIVLTKFRDFLNRVITMGEINGKLILSFPPFLIILLLLTFLKSLGVGFGKKTVTFPLWHLNYYVLHGCHSKWFRNF* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02198 543 SMART CXC_2 91 131 IPR033467 -
Phac4g02198 543 SMART CXC_2 176 217 IPR033467 -
Phac4g02198 543 ProSiteProfiles CRC domain profile. 92 216 IPR005172 -
Phac4g02198 543 MobiDBLite consensus disorder prediction 71 86 - -
Phac4g02198 543 MobiDBLite consensus disorder prediction 65 86 - -
Phac4g02198 543 PANTHER TESMIN/TSO1-RELATED 49 487 IPR028307 -
Phac4g02198 543 MobiDBLite consensus disorder prediction 357 421 - -
Phac4g02198 543 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 179 213 IPR005172 -
Phac4g02198 543 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 93 128 IPR005172 -
Phac4g02198 543 MobiDBLite consensus disorder prediction 388 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02198 Phac-Chr4 47986314 47994777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02198 72 495 CPP Transcription Factor Family AT4G29000 65.187 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Phac4g02198 TCR 2.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02198 - - gmx:100818116 888.641