Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02185 ATGTCAACAGCTCCAGCGCCGTCTTCGCCGCCCTCCAACACCACAGCGCCTCCGCCGTCCACTCCGGCGGCTCCGCCGCCGACCACACCTTCCGCGCCGCCTCCAGCCACTCCCTCGTCACCTCCACCAACACCTCCATCGTCGCCGCCTCCTGCAACTCCCTCCGCGCCTCCGCCGGCGACACCTTCTTCTCCACCTCCGTCCACTCCGTCCTCTCCTCCACCGTCCACTCCTTCGACTCCAACCCCGCCGTCGAGCAATCCACCATCGAGTTCTCCACCCTCGCCTCCGTCGAGCTCTCCTCCGTCGCCGCCGTCGGGTACTCCACCTTCACCTCCGAGTAGCGGGGGAGGCGGCAACACTCCTTCCCCACCGTCTCGGAGCTCGCCTTCTCCTCCGTCCGGATCGACTCCCACCACTCCTTCTCCTCCGCCGTCGTCTTCGTCGGGTGTTTCGACTGGCGTGGTGGTCGGAATCGCCGTGGGTGCCGTCGCGGTTCTTGTTGTGTTAAGCATTCTCTGCATATGCTGTCGGAAGAAGAAGAGAAGACGCGACGAGGAGTACTATGCTCCGCCGCCGCAGCGACCAAAAGATGATTATGGTGGTCCCCCACGTCAATGGCAACACAATGTTCCCCCTCCGCAGGATCATGTGGTTTCAGTGATGCCTCCAAAGCCATCGCTTCCGCCGGCTCCGGCTTATGCTGCTCAAACTGCTCCTCCCCCGCCTCCTTTGTTCACCAGCAGTGGTGGGTCTGGATCAAACTATTCAGGTGGCGAACCACTTCCTCCTCCTTCTCCAGGGCTTTCATTGGGGTTCTCTAAGAGCACTTTTACCTACGAGGAGTTGGCACGCGCTACAGATGGATTCTCTGATGCGAACCTCCTTGGACAAGGTGGATTTGGATATGTTCACAGAGGAATTCTTCCCAATGGCAAGGAGGTGGCAGTGAAGCAATTGAAGGCTGGAAGTGGGCAAGGGGAGCGTGAGTTCCAGGCTGAAGTTGAGATTATTAGCCGTGTCCATCACAAGCATCTTGTATCTTTGGTCGGATACTGCATCACTGGGTCCCAGAGATTGCTTGTTTATGAATTTGTTCCAAACAACACATTGGAGTTCCATTTGCATGGAAGAGGACGACCTACCATGGATTGGCCCACAAGACTAAGAATTGCCTTAGGATCTGCTAAGGGACTGGCATATCTTCATGAAGATTGTCATCCTAAGATCATCCATCGTGATATCAAGTCTGCCAACATTCTTCTGGATTTTAAGTTTGAAGCCAAGGTTGCAGATTTCGGTCTTGCTAAGTTTTCTTCTGATCTTAATACTCATGTTTCTACACGAGTGATGGGGACTTTTGGGTATCTGGCTCCAGAATATGCTTCTAGTGGAAAACTCACAGACAAATCAGATGTTTTCTCCTATGGAGTCATGCTCCTTGAGTTAATAACTGGACGGCGACCAGTTGATAAAAATCAAACATTCATGGAGGATAGTTTGGTAGAATGGGCTAGACCTTTGCTCACACGAGCTTTGGAAGAGGATGATTTTGACTCTATTATTGACCCAAGGCTTCAGAATGACTATGACCCTAATGAGATGGCACGAATGGTGGCATGTGCTGCAGCTTCCACACGTCATTCTGCAAAGCGCAGACCAAGAATGAGCCAGGTTGTGCGTGCTCTGGAAGGAGACGTGTCTCTAGCAGATCTTAACGAAGGAATCAAACCTGGACATAGCACTATGTACAGTTCTCATGAAAGCTCAGATTATGATACTGTACAGTACAAGGAAGACATGAAAAAGTTCAGAAAAATGGCATTGGGAACTCAGGAATATGGTGCAAGCAGCGAATACAGTGCAGCTACAAGTGAGTATGGTTTAAACCCATCTGGCTCAAGCAGTGAAGCTCAGAGCCGCCAAACCACAAGGGAAATGGAAATGAGAAAGATGATGAAGAACAGTCAAGGTTTCAGTGGAAGCTCTTGA 1992 0.5206 MSTAPAPSSPPSNTTAPPPSTPAAPPPTTPSAPPPATPSSPPPTPPSSPPPATPSAPPPATPSSPPPSTPSSPPPSTPSTPTPPSSNPPSSSPPSPPSSSPPSPPSGTPPSPPSSGGGGNTPSPPSRSSPSPPSGSTPTTPSPPPSSSSGVSTGVVVGIAVGAVAVLVVLSILCICCRKKKRRRDEEYYAPPPQRPKDDYGGPPRQWQHNVPPPQDHVVSVMPPKPSLPPAPAYAAQTAPPPPPLFTSSGGSGSNYSGGEPLPPPSPGLSLGFSKSTFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGRGRPTMDWPTRLRIALGSAKGLAYLHEDCHPKIIHRDIKSANILLDFKFEAKVADFGLAKFSSDLNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSYGVMLLELITGRRPVDKNQTFMEDSLVEWARPLLTRALEEDDFDSIIDPRLQNDYDPNEMARMVACAAASTRHSAKRRPRMSQVVRALEGDVSLADLNEGIKPGHSTMYSSHESSDYDTVQYKEDMKKFRKMALGTQEYGASSEYSAATSEYGLNPSGSSSEAQSRQTTREMEMRKMMKNSQGFSGSS* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02185 663 MobiDBLite consensus disorder prediction 10 145 - -
Phac4g02185 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Phac4g02185 663 MobiDBLite consensus disorder prediction 614 642 - -
Phac4g02185 663 CDD STKc_IRAK 296 565 - -
Phac4g02185 663 FunFam proline-rich receptor-like protein kinase PERK1 268 365 - -
Phac4g02185 663 Pfam Protein tyrosine and serine/threonine kinase 295 562 IPR001245 GO:0004672|GO:0006468
Phac4g02185 663 Gene3D Transferase(Phosphotransferase) domain 1 366 574 - -
Phac4g02185 663 PRINTS Proline rich extensin signature 8 20 - -
Phac4g02185 663 PRINTS Proline rich extensin signature 22 43 - -
Phac4g02185 663 PRINTS Proline rich extensin signature 43 59 - -
Phac4g02185 663 ProSiteProfiles Protein kinase domain profile. 290 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02185 663 FunFam Proline-rich receptor-like protein kinase PERK1 366 574 - -
Phac4g02185 663 MobiDBLite consensus disorder prediction 1 152 - -
Phac4g02185 663 Gene3D Phosphorylase Kinase; domain 1 270 365 - -
Phac4g02185 663 SMART serkin_6 290 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02185 663 MobiDBLite consensus disorder prediction 614 663 - -
Phac4g02185 663 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 162 626 IPR047117 -
Phac4g02185 663 MobiDBLite consensus disorder prediction 183 270 - -
Phac4g02185 663 SUPERFAMILY Protein kinase-like (PK-like) 265 563 IPR011009 -
Phac4g02185 663 ProSitePatterns Protein kinases ATP-binding region signature. 296 318 IPR017441 GO:0005524
Phac4g02185 663 MobiDBLite consensus disorder prediction 217 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02185 Phac-Chr4 47943781 47956863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02185 112 645 Trihelix Transcription Factor Family AT1G70460 51.391 4.42e-176 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Phac4g02185 PK_Tyr_Ser-Thr 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02185 - - gmx:100781944 843.188