Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02164 ATGCCGACTCGATCAACGGGAGCCATAACACAAGACTGGGATCCCGTCGTTCTGCACAGGGCCAAGCCCAAGGCGCAGGACCTCCGTAACCCCAAGGTCGTCAACCAGGCGCTCCGGTCCGGCGCGGAGGTGCTCACGGTAAAGAAGTTCGACGCCGGTTCGAACCGGAAGGCCGGCGGTCCGGCCGTGAACGTGAGGAAGCTAGAGGAGGGGACGGAGCCAGCGGCGTTGGAGCGCGTGGCGGGAGAGGTCCGGCACGCGATCCAGAAGGCGCGTTTGGAGAAGAAGATGAGCCAGGCGGAGCTGGCGAAGCAGATCAACGAGCGAACGCAGGTAGTGCAGGAGTACGAAAATGGCAAGGCAGTGCCTAACCAGGCCGTGCTGGCCAAAATTGAGAGGGTTCTCGGTGTCAAGCTCAGGGGCAAAATCGGAAAGTGA 438 0.621 MPTRSTGAITQDWDPVVLHRAKPKAQDLRNPKVVNQALRSGAEVLTVKKFDAGSNRKAGGPAVNVRKLEEGTEPAALERVAGEVRHAIQKARLEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLAKIERVLGVKLRGKIGK* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02164 145 ProSiteProfiles Cro/C1-type HTH domain profile. 88 142 IPR001387 -
Phac4g02164 145 FunFam Multiprotein bridging factor 1 72 145 - -
Phac4g02164 145 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 11 142 - -
Phac4g02164 145 SMART mbf_short4 87 142 IPR001387 -
Phac4g02164 145 Pfam Helix-turn-helix 88 139 IPR001387 -
Phac4g02164 145 Coils Coil 88 110 - -
Phac4g02164 145 SUPERFAMILY lambda repressor-like DNA-binding domains 85 139 IPR010982 GO:0003677
Phac4g02164 145 Pfam Multiprotein bridging factor 1 11 80 IPR013729 -
Phac4g02164 145 CDD HTH_XRE 87 139 IPR001387 -
Phac4g02164 145 Gene3D - 71 145 IPR010982 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02164 Phac-Chr4 47759842 47760835 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Phac4g02164 MBF1 2.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02164 K03627 - twl:119996545 235.343