Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02159 ATGGACGACATGGAAGACGACGCAAGGTACCCTCCAAAGTCCTTCTCTCTTAACCGTCAGAACCCCTCCCACCGACACAAACACCCCGTACGCGCCGCCCCTTACCACCGCCCAATGCCCACGCGCTACGATCAGTCCATCGTCGACGACGACGATGACGATGAAGAAAACGAACACGAAGATTTCAACGACGACAACGACGAAGGCGAAAACGGCTACGACGAAAACGACGTCGTCGGGTATCCCCGGATCCCGAAGAAGCGCAAGGTGGTAGTCGCGCCAGGATCCTACGAATTCGCGCCACGTTTCAAATTGTCGTACGGTTCGCGCGGTTCGGGTTCTTCCGGGGAAGAGTGGAGCGATCACGAGACTTTCGTGCTGCTGGAGGTGTGGGGGGACAAGTTCCTCCAGCTCGGGAGGAACAGTTTGAGGTCGGAGGAATGGCGCGAGGTTGCCGAAAAGGTTTCGGAGGAATTGAAAACGGAGAGAAGCGTGACGCAGTGTAGGAGCGTGCTGGACAAGCTGAAGAGAAAGTACAAGAAGGAGAAAACCAAAATGGATGAAATGGGAATGGGCTCTTGCAAATGGGCCTTCTTCAAGAAGATGGACATGTTGATGGCATCCTCTGCAAGGCAAGAGTCCAATGGATTTGATGAGATGAGGGACAGTCCAGGGGAGTCTGAGAGTGATGATGATGATGAAGAGGAAGAGGAATGTGGTGGTGGCGGTGCTGCTGCTGCTGCTGAGGATGAGGAGGACGAGACATCGTTCCGTGTGTTGGCGGATTCGATTCAGAAGTTTGGGAAGATTTATGAGAAGATTGAGAACAGCAAGAGGCAGCAGATGATGGAGTTGGAGAAGATGAGGCTGGATTTTAACAGGGAGTTGGAGCTGCAGAAGAAGCAGATTCTCGAGAGGGCGCAGGCTGAGATTGCCAAAATTCAGGAAGGGGATGAGGAGGATACCGACACTTCCACGGAGAATCTCAGTGAATGA 996 0.5321 MDDMEDDARYPPKSFSLNRQNPSHRHKHPVRAAPYHRPMPTRYDQSIVDDDDDDEENEHEDFNDDNDEGENGYDENDVVGYPRIPKKRKVVVAPGSYEFAPRFKLSYGSRGSGSSGEEWSDHETFVLLEVWGDKFLQLGRNSLRSEEWREVAEKVSEELKTERSVTQCRSVLDKLKRKYKKEKTKMDEMGMGSCKWAFFKKMDMLMASSARQESNGFDEMRDSPGESESDDDDEEEEECGGGGAAAAAEDEEDETSFRVLADSIQKFGKIYEKIENSKRQQMMELEKMRLDFNRELELQKKQILERAQAEIAKIQEGDEEDTDTSTENLSE* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02159 331 MobiDBLite consensus disorder prediction 224 240 - -
Phac4g02159 331 MobiDBLite consensus disorder prediction 210 258 - -
Phac4g02159 331 Gene3D - 119 181 - -
Phac4g02159 331 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 108 318 IPR044823 -
Phac4g02159 331 MobiDBLite consensus disorder prediction 1 80 - -
Phac4g02159 331 MobiDBLite consensus disorder prediction 312 331 - -
Phac4g02159 331 Coils Coil 271 313 - -
Phac4g02159 331 Pfam Myb/SANT-like DNA-binding domain 118 204 IPR044822 -
Phac4g02159 331 MobiDBLite consensus disorder prediction 47 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02159 Phac-Chr4 47737753 47739012 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02159 119 320 Trihelix Transcription Factor Family AT1G54060 30.189 1.42e-19 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phac4g02159 Myb_DNA-bind_4 1.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02159 - - gmx:100790166 414.461