Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02149 ATGGATCTTGAAGACAAGTTCCTTGCTAAAGTTTCTGGTGTTCAAAGCCTTTCATCTAGTGCACAAAGTACTCCTGAAAAAAATGGTCATTCAGACGATGCTTCAAGAAGTTCAGAACTACTTCAGGAGTTCTTAAAACCTGGTCTGAAGAAGGAGCTTCTACGAACTTGCTTTGATAAGGACGAAAAGAACATTTCTTCAAAAAGCAGGATGTCTGAAACTAAGTCAACCAGCAAGATTGTCAAGAAACAGGACTCAAAAAAAGTTTCTGGTGTCAGCAATCAGTCTTCTAGGAAGCAACATCGCAAAGGAGAAAACCCTGTGCGGTTTGTACCAGCTCCTGACCCACCTAGTGATTTTGGACACTCAAACTCCTGGATTTGTAAGAATTCTGCTTGTCGAGCAGTTCTCTCTAAAGATGACACATTTTGTAGAAGGTGCTCTTGCTGTATTTGCCACCTTTTTGATGATAATAAGGATCCCAGCCTTTGGTTGGTATGCACATGTGAATCTGCTCAAGGGGACTCGTGTGGATTGTCTTGCCATATTGAGTGTGCTCTTCAACATGAAAAAGTTGGAGTTGTTGATCACGGACAACTGATGCAATTAGATGGTGGTTATTGTTGTGCATCCTGTGGTAAAGTTACTGGGATACTTGGATGTTGGAAGAAGCAGCTAAGCATAGCAAAAGATGCTCGACGTGTAGATGTATTATGTTTCAGGATATATTTGAGCTACAGGCTTTTGGATGGTACTTCAAGATTTAAAGAATTGCATGAAATGGTAAAAGAAGCAAAGGCTAAACTGGAAACTGAAGTTGGTCCAGTTAATGGGGTTTCTGCCAAAATGGCACGTGGGATTGTCAGCAGACTCCCTATTGCTAGTGATGTCCAAAAACTCTGCTCTCTTGCTATTGAGAAAGCTGATGATTGGTTGGCCACTGTTCCCAATGTAAATCCAGAATCCAGAGAGGGTTCACTTCCCGCTGCCTGCAAGGTTGTGTTTGAAGAGGTGACTGCTTCCTCAGTCAAAATAATTTTAATTGAAATGTCAAATGCATCATCTGGGGACATTAAGGGATACAAGCTATGGTATTACAAGAGCAGGGAGGAATCACACACTAAAGATCCTGTTTGTGTTTTTCCCAAATCTCAGAGAAGGATTTTGTTATCCAACCTCCAACCTTGCACGGAATATACTTTTCGGATTGTATCTTTTACTGATACGGGTGATCTGGGTCACTCTGAGACCAAGTGTTTCACCAAGAGCGTTGAGATATTGGAAAAGAATTCATCTTCATCAGTGGCTGTGAATAAAAAAAGGGAGAACCTTCAAGCTGAATGCAATTCTTCTGGTTCCAAATTGGAGCCCAATCCCACATCTGCAGACTCTGGATTTAAGGTTCGAGACCTTGGAAAAATCTTGCATCTTACTTGGGCTCAAGAACAAGGTAGCTTTGAGGGGTTTTGCTGTGCTGACAAGAGAAATTGCTGTGGGCAGAGTGAAACTATCAAGCCTAGCAAACCACAAGAGCAGTTGCCTTCAGTTTCACGTGACCTTGATCTAAATGTTGTTTCAGTGCCTGATTTGAACGAAGAGCTGACACCTCCTTTTGAGTCTTCCAGGGATGAAGATAATGGTTGTACCTTGCAGCAGGCTGTTGAGGCTGATGATGATGCTGCTTCTCATGATTTAGACAAAAATTTAGCAAGATCACATGGTAGTGGTGGTTCGCAAACATGGAACCATGGACAAACCGGAGAAGTTCCTGCTGTTGACTCACGTGGAGACGCAAGTAGGAAAAGGAAAACTAGCACAAATGAAGAGACACATGATTGTGACAGCACTTTGATAAATGGCTCTCCTTTACGCCCTTCTGATGGTCCATTCTCTTTAGATGAAAACTTTGAGTATTGTGTGAAAGTAATTCGCTGGCTAGAATGCCAGGGTCATATCAAGCAGGAATTTAGGTTGAAATTGCTGACATGGTTTAGTTTGAGGTCGACAGAGCAAGAACGAAGGGTGGTAAATACTTTCATTCAAACTCTGATTGATGATCCTAGTAGTTTGGCAGGGCAACTAGTTGACTCATTTTCTGATATTATATCCAACAAGAGGCCAAGAAATGGGTTCTGCAACAAGACTGTGACATCAAGTTAA 2160 0.419 MDLEDKFLAKVSGVQSLSSSAQSTPEKNGHSDDASRSSELLQEFLKPGLKKELLRTCFDKDEKNISSKSRMSETKSTSKIVKKQDSKKVSGVSNQSSRKQHRKGENPVRFVPAPDPPSDFGHSNSWICKNSACRAVLSKDDTFCRRCSCCICHLFDDNKDPSLWLVCTCESAQGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLSIAKDARRVDVLCFRIYLSYRLLDGTSRFKELHEMVKEAKAKLETEVGPVNGVSAKMARGIVSRLPIASDVQKLCSLAIEKADDWLATVPNVNPESREGSLPAACKVVFEEVTASSVKIILIEMSNASSGDIKGYKLWYYKSREESHTKDPVCVFPKSQRRILLSNLQPCTEYTFRIVSFTDTGDLGHSETKCFTKSVEILEKNSSSSVAVNKKRENLQAECNSSGSKLEPNPTSADSGFKVRDLGKILHLTWAQEQGSFEGFCCADKRNCCGQSETIKPSKPQEQLPSVSRDLDLNVVSVPDLNEELTPPFESSRDEDNGCTLQQAVEADDDAASHDLDKNLARSHGSGGSQTWNHGQTGEVPAVDSRGDASRKRKTSTNEETHDCDSTLINGSPLRPSDGPFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISNKRPRNGFCNKTVTSS* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02149 719 MobiDBLite consensus disorder prediction 65 86 - -
Phac4g02149 719 MobiDBLite consensus disorder prediction 13 41 - -
Phac4g02149 719 CDD FN3 332 421 IPR003961 GO:0005515
Phac4g02149 719 Pfam Fibronectin type III domain 332 413 IPR003961 GO:0005515
Phac4g02149 719 MobiDBLite consensus disorder prediction 572 587 - -
Phac4g02149 719 MobiDBLite consensus disorder prediction 594 610 - -
Phac4g02149 719 MobiDBLite consensus disorder prediction 567 626 - -
Phac4g02149 719 SUPERFAMILY Fibronectin type III 331 412 IPR036116 GO:0005515
Phac4g02149 719 MobiDBLite consensus disorder prediction 13 28 - -
Phac4g02149 719 Gene3D Immunoglobulins 314 425 IPR013783 -
Phac4g02149 719 ProSiteProfiles Fibronectin type-III domain profile. 329 426 IPR003961 GO:0005515
Phac4g02149 719 PANTHER VIN3-LIKE PROTEIN 2-RELATED 16 714 IPR044514 GO:0010048|GO:0040029
Phac4g02149 719 Pfam PHD - plant homeodomain finger protein 128 246 IPR032881 -
Phac4g02149 719 MobiDBLite consensus disorder prediction 65 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02149 Phac-Chr4 47636117 47644060 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02149 124 710 PHD Gene Family AT3G24440 49.088 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02149 - - gmx:100780157 1363.59