Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02148 ATGTCTGAAACTAAGTCAACCAGCAAGATTGTCAAGAAACAGGACTCAAAAAAAGTTTCTGGTGTCAGCAATCAGTCTTCTAGGAAGCAACATCGCAAAGGAGAAAACCCTGTGCGGTTTGTACCAGCTCCTGACCCACCTAGTGATTTTGGACACTCAAACTCCTGGATTTGTAAGAATTCTGCTTGTCGAGCAGTTCTCTCTAAAGATGACACATTTTGTAGAAGGTGCTCTTGCTGTATTTGCCACCTTTTTGATGATAATAAGGATCCCAGCCTTTGGTTGGTATGCACATGTGAATCTGCTCAAGGGGACTCGTGTGGATTGTCTTGCCATATTGAGTGTGCTCTTCAACATGAAAAAGTTGGAGTTGTTGATCACGGACAACTGATGCAATTAGATGGTGGTTATTGTTGTGCATCCTGTGGTAAAGTTACTGGGATACTTGGATGTTGGAAGAAGCAGCTAAGCATAGCAAAAGATGCTCGACGTGTAGATGTATTATGTTTCAGGATATATTTGAGCTACAGGCTTTTGGATGGTACTTCAAGATTTAAAGAATTGCATGAAATGGTAAAAGAAGCAAAGGCTAAACTGGAAACTGAAGTTGGTCCAGTTAATGGGGTTTCTGCCAAAATGGCACGTGGGATTGTCAGCAGACTCCCTATTGCTAGTGATGTCCAAAAACTCTGCTCTCTTGCTATTGAGAAAGCTGATGATTGGTTGGCCACTGTTCCCAATGTAAATCCAGAATCCAGAGAGGGTTCACTTCCCGCTGCCTGCAAGGTTGTGTTTGAAGAGGTGACTGCTTCCTCAGTCAAAATAATTTTAATTGAAATGTCAAATGCATCATCTGGGGACATTAAGGGATACAAGCTATGGTATTACAAGAGCAGGGAGGAATCACACACTAAAGATCCTGTTTGTGTTTTTCCCAAATCTCAGAGAAGGATTTTGTTATCCAACCTCCAACCTTGCACGGAATATACTTTTCGGATTGTATCTTTTACTGATACGGGTGATCTGGGTCACTCTGAGACCAAGTGTTTCACCAAGAGCGTTGAGATATTGGAAAAGAATTCATCTTCATCAGTGGCTGTGAATAAAAAAAGGGAGAACCTTCAAGCTGAATGCAATTCTTCTGGTTCCAAATTGGAGCCCAATCCCACATCTGCAGACTCTGGATTTAAGGTTCGAGACCTTGGAAAAATCTTGCATCTTACTTGGGCTCAAGAACAAGGTAGCTTTGAGGGGTTTTGCTGTGCTGACAAGAGAAATTGCTGTGGGCAGAGTGAAACTATCAAGCCTAGCAAACCACAAGAGCAGTTGCCTTCAGTTTCACGTGACCTTGATCTAAATGTTGTTTCAGTGCCTGATTTGAACGAAGAGCTGACACCTCCTTTTGAGTCTTCCAGGGATGAAGATAATGGTTGTACCTTGCAGCAGGCTGTTGAGGCTGATGATGATGCTGCTTCTCATGATTTAGACAAAAATTTAGCAAGATCACATGGTAGTGGTGGTTCGCAAACATGGAACCATGGACAAACCGGAGAAGTTCCTGCTGTTGACTCACGTGGAGACGCAAGTAGGAAAAGGAAAACTAGCACAAATGAAGAGACACATGATTGTGACAGCACTTTGATAAATGGCTCTCCTTTACGCCCTTCTGATGGTCCATTCTCTTTAGATGAAAACTTTGAGTATTGTGTGAAAGTAATTCGCTGGCTAGAATGCCAGGGTCATATCAAGCAGGAATTTAGGTTGAAATTGCTGACATGGTTTAGTTTGAGGTCGACAGAGCAAGAACGAAGGGTGGTAAATACTTTCATTCAAACTCTGATTGATGATCCTAGTAGTTTGGCAGGGCAACTAGTTGACTCATTTTCTGATATTATATCCAACAAGAGGCCAAGAAATGGGTTCTGCAACAAGACTGTGACATCAAGTTAA 1950 0.4221 MSETKSTSKIVKKQDSKKVSGVSNQSSRKQHRKGENPVRFVPAPDPPSDFGHSNSWICKNSACRAVLSKDDTFCRRCSCCICHLFDDNKDPSLWLVCTCESAQGDSCGLSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLSIAKDARRVDVLCFRIYLSYRLLDGTSRFKELHEMVKEAKAKLETEVGPVNGVSAKMARGIVSRLPIASDVQKLCSLAIEKADDWLATVPNVNPESREGSLPAACKVVFEEVTASSVKIILIEMSNASSGDIKGYKLWYYKSREESHTKDPVCVFPKSQRRILLSNLQPCTEYTFRIVSFTDTGDLGHSETKCFTKSVEILEKNSSSSVAVNKKRENLQAECNSSGSKLEPNPTSADSGFKVRDLGKILHLTWAQEQGSFEGFCCADKRNCCGQSETIKPSKPQEQLPSVSRDLDLNVVSVPDLNEELTPPFESSRDEDNGCTLQQAVEADDDAASHDLDKNLARSHGSGGSQTWNHGQTGEVPAVDSRGDASRKRKTSTNEETHDCDSTLINGSPLRPSDGPFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISNKRPRNGFCNKTVTSS* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02148 649 MobiDBLite consensus disorder prediction 497 556 - -
Phac4g02148 649 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 644 IPR044514 GO:0010048|GO:0040029
Phac4g02148 649 MobiDBLite consensus disorder prediction 502 517 - -
Phac4g02148 649 MobiDBLite consensus disorder prediction 524 540 - -
Phac4g02148 649 MobiDBLite consensus disorder prediction 1 16 - -
Phac4g02148 649 MobiDBLite consensus disorder prediction 1 45 - -
Phac4g02148 649 CDD FN3 262 351 IPR003961 GO:0005515
Phac4g02148 649 Gene3D Immunoglobulins 244 355 IPR013783 -
Phac4g02148 649 Pfam PHD - plant homeodomain finger protein 58 176 IPR032881 -
Phac4g02148 649 SUPERFAMILY Fibronectin type III 261 342 IPR036116 GO:0005515
Phac4g02148 649 ProSiteProfiles Fibronectin type-III domain profile. 259 356 IPR003961 GO:0005515
Phac4g02148 649 Pfam Fibronectin type III domain 262 343 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02148 Phac-Chr4 47636117 47644060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02148 54 640 PHD Gene Family AT3G24440 49.088 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02148 - - gmx:100780157 1246.11