Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02096 ATGTCAGGCATTCCAAGAGCAACTCGGCAACAAGGAATGGAATGTAAGAGAGGAAAAGAGAAGGTTCCAGCCAAAGAAGTAGACGTAAGAACAATGATGAAACTTAGAATTGTGTACACTGACCCTGATGCCACAGATTACTCAAGTGAAGAAGATGATAAGTTGTTGATCAATGGCTATCAGTTTGATGGTTGCTCCAAGCGTGTTGTCAAGGAAATCTTGCTTCCATGCATACAAAGCAAATCACAAGAAGAGTGTTCTTCAGAAGATGCAAACAGTGAAAAGATCAAAGCAAGTTCAGGCCATTTTTCAAGTAGGAGGATGAGGAAACCATCAAGCATGTACAAAGGTGTTCAACGTAGGAAATGGGGGAAATATGTAGCAGAAATTAGAGACCCTATTCAAGGGGTCAGAGTGTGGCTTGGTACATTTGATACTGAACAAGAGGCTGCTATGGCTTATGAGAGGAAGAAGAATGAGTTTGAAAGCTATTTGTTGGCTTCTAGCAAAATGGATTTTGAGAGTTCCAAAGAAGTGTTGTTTCATGCATCTCCATCATCAGTGCTTGATGTCAGCACTACAAAAGCTCCACCAGATGTTAATGACCTGAATGATTCAGTCAAAGAAAAGGTGAATGTGGAAAAAGTTGGTGAAGGAGGAGGCATTGATGTAGAAGCAGTTAATAGTGAAGATAATTCAACTCTACATTTGCTAGAGGAGCCAGTTGTGCCATCATTGTTTGGTCATGAAGATTTCTATTTGGATGAAGCAGAGAAAGGGGGAATGTTGCTTGGTAATGACTTTTATAATTTCTCAGACAATGACATCAAAGGTGGTTTTATGTGGAATGTGGAACATGGGGAAGCCACTGTCCTTCCACCTGTGGACAGTGCTTTTGATGAGTTAGCTTGGATTGATGAAACTCTAAATTTGGAAAACTCATAA 945 0.4021 MSGIPRATRQQGMECKRGKEKVPAKEVDVRTMMKLRIVYTDPDATDYSSEEDDKLLINGYQFDGCSKRVVKEILLPCIQSKSQEECSSEDANSEKIKASSGHFSSRRMRKPSSMYKGVQRRKWGKYVAEIRDPIQGVRVWLGTFDTEQEAAMAYERKKNEFESYLLASSKMDFESSKEVLFHASPSSVLDVSTTKAPPDVNDLNDSVKEKVNVEKVGEGGGIDVEAVNSEDNSTLHLLEEPVVPSLFGHEDFYLDEAEKGGMLLGNDFYNFSDNDIKGGFMWNVEHGEATVLPPVDSAFDELAWIDETLNLENS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02096 314 Pfam AP2 domain 115 162 IPR001471 GO:0003700|GO:0006355
Phac4g02096 314 MobiDBLite consensus disorder prediction 1 20 - -
Phac4g02096 314 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Phac4g02096 314 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Phac4g02096 314 SUPERFAMILY DNA-binding domain 113 161 IPR016177 GO:0003677
Phac4g02096 314 Gene3D AP2/ERF domain 114 174 IPR036955 GO:0003700|GO:0006355
Phac4g02096 314 CDD AP2 113 156 IPR001471 GO:0003700|GO:0006355
Phac4g02096 314 ProSiteProfiles AP2/ERF domain profile. 114 174 IPR001471 GO:0003700|GO:0006355
Phac4g02096 314 MobiDBLite consensus disorder prediction 86 111 - -
Phac4g02096 314 SMART rav1_2 114 178 IPR001471 GO:0003700|GO:0006355
Phac4g02096 314 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 34 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02096 Phac-Chr4 47294661 47295761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02096 28 177 AP2-EREBP Transcription Factor Family AT1G68550 39.103 1.50e-21 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac4g02096 AP2 1.6e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02096 - - pvu:PHAVU_004G157600g 576.63