Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02091 ATGAACAACGAAATGAAAGAAGCAAGTGCATTAGGAGCTAGAACTGCACGAGCATGCGAGAGCTGTCTAAAAGTAAGAGCAAGGTGGTATTGTGCAGCTGATGATGCTTTCCTCTGCCATGGCTGTGACAACATGGTTCACTCGGCCAACCAATTAGCAAGCAGGCACCAAAGGGTCAAGCTTCAAACTGCATCCTCTAAGCTCAACTACTCTTCCACCCTTAATCATAACAAAAAGGTAGCATGGCACAGTGGATTCACACGCAAGGCAAGAACACCACGCCACAACACCAAGCTACAAGAGCAACAACAAAAGAAAGTACATGAAGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGCGCTTTTCAATAACACCATTAGTCTTCCCCTTGTGCCAGAGCTTGGAAGTGAAGAAGCACTGTATAATGATGAGAGTGAGGAGCAGCTATTGTGCCGCGTGCCCGTGTTTGATGCTGAGCTTTGTAGTGTATACAATGAAGTGAAGGAAGAGGTTTTGGCTGGTGAAGAAGTCTTTGACTTGGAAAATTTTTCTTCCGAGTTTCTGCCATCAGATATGGATCTTGCTGAGTTCGCTGCTGATGTGGAAAGCTTGCTTGGAAATGGAGCTGATGAGGATTCATCTGAGCATGTGAAAGGATCAGAAGTTGTGCTTGATTGCAAAGAAGAAGATGATGAAATGGATGCATGTGTTGATGGAGTTGGAGAAAAAGATGCAATGGTGAAGGTGAAAGATGAAGAAGAAGTTGATGCTGACACATCTTGCCATTTGGATTCGATTATTCTTGACATGAATTGGAATGATATTGTTGAGTCAGAATCACTTGCTCAGGAACAGGATAAGAAGGACATGTTTTTGAGGCTAAACTATGAAGATGTTATTGCTGCTTGGGCCAGTCAAGGTTGTCCATGGACAACAGGAACCCCACCTAACTTCAACTCTGATGATTTCTTGCCAGATTTCTTGGGTTCGAATGGTGAGGATGTTCTATGCTGTTATGGGGAAATGAGAAGTTTAAGAGGGCATGCAGATGGGGGAAGAGAAGCAAGAGTGTCAAGATACCGAGAGAAGAGAAGAACTCGTTTATTTGCAAAGAAGATAAGGTATGAAGTGAGGAAGTTGAACGCAGAGAAAAGACCAAGAATGAAAGGTAGATTTGTGAAGAGAACATCATTTCTTGGAGCCACTGTTTTGCCAGCTTAG 1221 0.4316 MNNEMKEASALGARTARACESCLKVRARWYCAADDAFLCHGCDNMVHSANQLASRHQRVKLQTASSKLNYSSTLNHNKKVAWHSGFTRKARTPRHNTKLQEQQQKKVHEEGEEEEEEEEALFNNTISLPLVPELGSEEALYNDESEEQLLCRVPVFDAELCSVYNEVKEEVLAGEEVFDLENFSSEFLPSDMDLAEFAADVESLLGNGADEDSSEHVKGSEVVLDCKEEDDEMDACVDGVGEKDAMVKVKDEEEVDADTSCHLDSIILDMNWNDIVESESLAQEQDKKDMFLRLNYEDVIAAWASQGCPWTTGTPPNFNSDDFLPDFLGSNGEDVLCCYGEMRSLRGHADGGREARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRTSFLGATVLPA* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02091 406 Pfam CCT motif 353 395 IPR010402 GO:0005515
Phac4g02091 406 Coils Coil 99 119 - -
Phac4g02091 406 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
Phac4g02091 406 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 8 397 - -
Phac4g02091 406 CDD Bbox1_BBX-like 18 59 - -
Phac4g02091 406 ProSiteProfiles CCT domain profile. 353 395 IPR010402 GO:0005515
Phac4g02091 406 MobiDBLite consensus disorder prediction 94 110 - -
Phac4g02091 406 Pfam B-box zinc finger 16 61 IPR000315 GO:0008270
Phac4g02091 406 SMART bboxneu5 14 61 IPR000315 GO:0008270
Phac4g02091 406 MobiDBLite consensus disorder prediction 91 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02091 Phac-Chr4 47276307 47279751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02091 8 395 C2C2-CO-like Transcription Factor Family AT1G25440 42.488 5.08e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Phac4g02091 zf-B_box 4.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02091 - - gmx:100802113 598.586