Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02089 ATGCGGTTGAGCTGCAATGGTTGCCGCGTTCTCCGGCGAGGGTGCCCGGCGGAGTGCCCCATTCGGATCTCCCTTGAATGGATAAGTTGCCCTGAGTCTCAGTCCAACGCCACCCTCTTTCTGGCCAAGTTCTACGGCCGTCAAGGCCTCCTCAACCTCCTCTCCAACGCTCCCTCACATCTCCAACCAGGCGTATTCAAATCTTTGCTTTACGAAGCTTGCTGTCGGATGGTGAACCCGGTTTTCGGCTCGACCGGGTTACTCTCGACCGGAAATTGGCACCTCTGTGAAGCGGCTGCCACAGCTGTTCTTAGCGGCGCGCCGATTCAGCAAGCTCTTCTAGATATTCGCCACGTGGCAAAGAGTCATAAATCGTGCGGCCCTGATGCGCTCCACAGGGTGAAGTCACGAACCAGCAAGTTCAAGCGCCGCGCTGCGAAGCCAAAAGTGGACTCAACCGTGGCTGAGTTGGCTGAAAGCGAGTTAGATGGACAGGGTTCACTGAGTCATGACTCGGTGTCTGGGTTGACTCGGACGAGTGAGAACAAAATCGTTGGTGGGGAAGCCGATAGCAGCTGCAGCGAGAATGTGGTGGAGCCGGCTGCATCCAATGATGGAGAAATTGAGCTTCAGTTGACTTTGGGATGGGGTCCAGTGAAGAGATCAACGATCGTGATGTTGCCACGTGTAGGGATCAATCTCTCTGGCAACACGTGA 717 0.5551 MRLSCNGCRVLRRGCPAECPIRISLEWISCPESQSNATLFLAKFYGRQGLLNLLSNAPSHLQPGVFKSLLYEACCRMVNPVFGSTGLLSTGNWHLCEAAATAVLSGAPIQQALLDIRHVAKSHKSCGPDALHRVKSRTSKFKRRAAKPKVDSTVAELAESELDGQGSLSHDSVSGLTRTSENKIVGGEADSSCSENVVEPAASNDGEIELQLTLGWGPVKRSTIVMLPRVGINLSGNT* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02089 238 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Phac4g02089 238 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 214 - -
Phac4g02089 238 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02089 Phac-Chr4 47267340 47270187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02089 1 226 AS2 family AT3G02550 44.223 1.75e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac4g02089 LOB 5.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02089 - - vun:114181255 414.075