Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02088 ATGACTAAAATGGAAGAAGAAAAGGAAAATGAGATGAAGCTAGTTGAGAACACTAAAAGGGAAGAAAAGAGGGAATGCGACAAAGAGGTTATTAGATATATCAAAGAGTTGAAGGATAAAACTGTGGAAATTTCAACATTGAAGCAAAAGCTAGAAACAATGAAAAAAACATATGAAGTACAATGTTCACAGATGGAACAAAAAGCTAAGGAGGAAAATACAACAGATGGCAAAGAGGTTATTAGATATATTAACGAGTTAGAGGATAAAACTAAGGAAATTTCAGGATTAAAGCAAAAACTAGAAACTATGAAAAAAACGTGTGAAGAGCAGTGCTTAAAAATAGAAGCAAAAGCCAAAGAGGAAAAGATGACAGATGACAAAGATGAAATTAAAGTGCTAGAGGACAAAAGTAAGGAAATTTCAACGTTGAAGCAAAAAATAGAAAAGCTAGAAACAGTGATAAAAACTTATGAAGTACAATGTTCAGAATTGAAAGCAAAAGTTGAGGAGAAAAATATGGTAGATGGAAAAGATGCTAGTAGATATATTAAAGAATTGGAGGACAAAAATATGGAAATTTCAACATTAAACAAAAATATAGAGAACATGAAAAAATCATATGAAGTAGAATACTCACAGTTGAAAGAAAAAATTGAGGAAAAGGGAGCAGATGGTGAAGAGGTTAGTAGATATATTAAAGAGATAGAGGACAAAAACATGAAAATTTCAACACTGAGTCAAAGACTAGAAACAGTGACAAAAACATATGAAGTACAATGCTCAGAACTAAAAGCAAAAGCAGAGGAGGAAAAGGTAGCAGATGGAAAAGAGGCTATTAGATATATTAAAGAGTTGGAAGACAAAAATAAGGAAATTTCAGCACTTAAGCAAGAACTGGAAACAATGAAAAAATCTTATGAAGTTCAATGCTCACAGTTGAAAGCAAAAATTGAAGAGGAAAAAATTGCAGATGGGAATGAGAGTATTAGACATATTAAGGAGCTAGAGGAAAAAAATATGGAAATTTCAGCATTTAAACAAGAACTAGAAACAATGAAAAAAGCACATGAAGTTCAATGCTCACAATTGAAAGCAAAAGCTGAAGAGGAAAAAGTGGTGGGTGGGAAAGAAATTATTAAATATACCAAAGAGCTAGATGACAAAAATATGGAAATTTCAGCATTTAAGCAAGAACTAGAAACAATGAAAGAAACATATGAAGTACAATGCTCACAATTGAAAGCAAAAGCTGAAGAGGAAAAAATGGCGAATGAGAAAGAAATTATGAAATATACAAAAGAGCTAGAAGAAAAAATTATGGAAATTTCATCATTTAAGCAAGAACTAGAAACAATGAAAAAAACACATGAAGTACAATGCTCACAATGGGAAGCAAAAGTGGAGGGTGGTAAAAAAGAACTGAAACAAAAATCACAAGAATATGAAAATTTGTTGGAAAAACTAAGAAATAAGGTTAAAGAGAATGAAACCCTTTACGAGTCAAAATATCAGAAGTGGTTCCAGAAAGAGAAGCAGATACGAAAAGATGTGAATTTTCAGTTCAGATTCATACAGAAATTGAAATTATCATGGGAATCTATTAAGCAAGATGCTTTGAAAGAGCAAATGATCTATTCTGAGGAATGTAAAAAACTTGGTGTAAATCTTAAATCACTAGTAGAAGCAGCTGAGAATTATCAAGTAGTTCTTGCAGAAAATCGAAAACTATTCAATGAAGTTCAAGAATTAAAAGGAAATATAAGAGTGTATTGTCGATTAAGACCATTTCTTCCTGGTCAAAAGGAAAAACAATCTATTGTGGAACATGTTGGTGAAAATGAGTTGGTTGTGGCAAATCCCGCCAAACAAGGAAAGGAAGCCCTTAGAACATTTAAGTTCAATAAGGTCTTTGGTCCAACATCAACCCAAGCTGGGGTGTATGCTGACATACAAGCCTTTATTCGATCAGTATTGGATGGTTTTAATCATGTCATGTTTCTGAACGATGATTTCCTTGATTTACACACACTTGGGATATTGAATCACGCTCAACCAAATGGATTAGCAGTACCTGATGCTACCATGCAACCTGTGAAGACAACTGAAGATGTGATAAATGTGGTCTCAATTCATGTTCGTGGGACGGATAAAAAGTCTGGTTCCTCTCTTCATGGTAATCTTCATTTGGTAGATTTAGCAGGAAGTGAAAGAATAGATCGCTCCGAAGTAACTGGGGATAGACTCAAGGAAGCACAACATATTAATAAATCATTATCTGCTCTTGGAGATGTCATTTTTGCACTTTCTCAAAAGAGTTCTCATGTGCCATATAGAAATAGCAAGCTCACTCAACTTCTGCAAACATCTCTTGGTGGTCAAGCAAAAACACTGATGTTAGTCCAAATTAATTCTGATGTAAAGTCTTTTTCTGAATCTTTGAGTACTTTAAAGTTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGAGCTGCTAAAAGTACTAAAGAAGGAAGAGATGTTAGAGAATTAATGGAACAGGTGGCTTCTCTGAAGGACACAATTTTGGTTAAAGATATTGAGATTGAGAAGTTACAATTACTTACGGATCTAAAAAATGTATATCCTGGTGCTAATTCTGAGAACAGTGAAACTGCCTAA 2658 0.3348 MTKMEEEKENEMKLVENTKREEKRECDKEVIRYIKELKDKTVEISTLKQKLETMKKTYEVQCSQMEQKAKEENTTDGKEVIRYINELEDKTKEISGLKQKLETMKKTCEEQCLKIEAKAKEEKMTDDKDEIKVLEDKSKEISTLKQKIEKLETVIKTYEVQCSELKAKVEEKNMVDGKDASRYIKELEDKNMEISTLNKNIENMKKSYEVEYSQLKEKIEEKGADGEEVSRYIKEIEDKNMKISTLSQRLETVTKTYEVQCSELKAKAEEEKVADGKEAIRYIKELEDKNKEISALKQELETMKKSYEVQCSQLKAKIEEEKIADGNESIRHIKELEEKNMEISAFKQELETMKKAHEVQCSQLKAKAEEEKVVGGKEIIKYTKELDDKNMEISAFKQELETMKETYEVQCSQLKAKAEEEKMANEKEIMKYTKELEEKIMEISSFKQELETMKKTHEVQCSQWEAKVEGGKKELKQKSQEYENLLEKLRNKVKENETLYESKYQKWFQKEKQIRKDVNFQFRFIQKLKLSWESIKQDALKEQMIYSEECKKLGVNLKSLVEAAENYQVVLAENRKLFNEVQELKGNIRVYCRLRPFLPGQKEKQSIVEHVGENELVVANPAKQGKEALRTFKFNKVFGPTSTQAGVYADIQAFIRSVLDGFNHVMFLNDDFLDLHTLGILNHAQPNGLAVPDATMQPVKTTEDVINVVSIHVRGTDKKSGSSLHGNLHLVDLAGSERIDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSSHVPYRNSKLTQLLQTSLGGQAKTLMLVQINSDVKSFSESLSTLKFAERVSGVELGAAKSTKEGRDVRELMEQVASLKDTILVKDIEIEKLQLLTDLKNVYPGANSENSETA* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02088 885 Gene3D - 128 167 - -
Phac4g02088 885 Gene3D - 326 366 - -
Phac4g02088 885 Gene3D - 226 265 - -
Phac4g02088 885 Gene3D - 73 116 - -
Phac4g02088 885 Gene3D - 424 465 - -
Phac4g02088 885 Gene3D - 176 217 - -
Phac4g02088 885 Gene3D - 375 416 - -
Phac4g02088 885 Gene3D - 25 66 - -
Phac4g02088 885 Gene3D - 275 316 - -
Phac4g02088 885 Coils Coil 333 367 - -
Phac4g02088 885 SMART kinesin_4 585 834 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac4g02088 885 Coils Coil 279 324 - -
Phac4g02088 885 Pfam Kinesin motor domain 708 824 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac4g02088 885 Coils Coil 37 75 - -
Phac4g02088 885 Gene3D Kinesin motor domain 530 669 IPR036961 -
Phac4g02088 885 Coils Coil 180 225 - -
Phac4g02088 885 Gene3D Kinesin motor domain 681 865 IPR036961 -
Phac4g02088 885 PRINTS Kinesin heavy chain signature 727 745 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac4g02088 885 PRINTS Kinesin heavy chain signature 776 797 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac4g02088 885 Pfam Microtubule binding 573 667 IPR031852 GO:0008017
Phac4g02088 885 ProSiteProfiles Kinesin motor domain profile. 708 826 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac4g02088 885 ProSiteProfiles Kinesin motor domain profile. 587 663 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Phac4g02088 885 Coils Coil 1 25 - -
Phac4g02088 885 Coils Coil 379 506 - -
Phac4g02088 885 Coils Coil 80 168 - -
Phac4g02088 885 PANTHER KINESIN-LIKE PROTEIN KLP-3 680 862 IPR027640 GO:0003777|GO:0007018
Phac4g02088 885 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 587 864 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02088 Phac-Chr4 47253971 47260074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02088 708 826 Calmodulin-binding Proteins AT5G65930 49.580 6.83e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02088 K10406 - gmx:100779403 888.256