Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02085 ATGAATCTGATGGAGGAAAATCTGCCTCCTGGATTCAGGTTTCATCCTACAGATGAAGAACTCATCACATGTTATCTTACAAACAAGGTTTCTGATTCTAGCTTCACCTCCAAAGCTATAGCAGTTGTTGATCTCAACAAATCTGAACCTTGGGACCTACCAGGTAAGGCCTCCATGGGAGAAAAAGAATGGTACTTCTTTAGCTTAAGAGACAGAAAGTATCCAACTGGACTTCGGACAAACCGAGCCACTGAATCAGGTTACTGGAAAACCACAGGGAAAGACAAGGAAATTTTTGGTACTGGTGTTTTGGTAGGAATGAAGAAAACCCTAGTCTTCTATAGGGGTAGAGCTCCAAGGGGAGAGAAAAGTAATTGGGTCATGCACGAATATAGACTTCAAAACAAGCATCACTTAAGACCTTCCAAGAATGAATGGGTGGTTTGCAGGGTTTTCCAAAAGAGCTTACAAGTGAAGAAACCACAGCAAACAAACTCATCACAACCAGAGTCCCCATGTGACACTGTCTCAATGGTCAATGAGTTTGGTGACTTTGAGCTTCCTAATCTGAATAGCATTGCAAATTCCTCAGGTGGACTCACCAACAATATTTCAGGAGACACTTTTATGAATGCTGATCTGAGTAATAGTGTTAACACAAACATGAACTTGGCCATGAATTGGCCTGTTGCAAGTGAGGTTCAGGTTCCCTCTCTTCCATCCCTACCATGGCCTTCTGGGTTGCTGAGTCCAACTATTTCTGTAAATTCTTTGCTTCTGAAGGCATTGCAACTTAGGAGTTATCAACAAAGAGAAGCAGCAGATCATCTTGCATCATATATGGCTCAAGGAGTTTGCCAAGTTGTTGGAACTGACCTAAGTTCAAATCTGAGAGCCTCTTCTTCAAAAGTTCATGAATGTATGCCACTGCAGCAACAACAACAGGAGCAACCATTCAATTTGGACTCCATTTGGTGA 978 0.4213 MNLMEENLPPGFRFHPTDEELITCYLTNKVSDSSFTSKAIAVVDLNKSEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKEIFGTGVLVGMKKTLVFYRGRAPRGEKSNWVMHEYRLQNKHHLRPSKNEWVVCRVFQKSLQVKKPQQTNSSQPESPCDTVSMVNEFGDFELPNLNSIANSSGGLTNNISGDTFMNADLSNSVNTNMNLAMNWPVASEVQVPSLPSLPWPSGLLSPTISVNSLLLKALQLRSYQQREAADHLASYMAQGVCQVVGTDLSSNLRASSSKVHECMPLQQQQQEQPFNLDSIW* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02085 325 FunFam NAC domain-containing protein 100-like 17 158 - -
Phac4g02085 325 Gene3D NAC domain 17 158 IPR036093 GO:0003677|GO:0006355
Phac4g02085 325 ProSiteProfiles NAC domain profile. 8 154 IPR003441 GO:0003677|GO:0006355
Phac4g02085 325 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 226 - -
Phac4g02085 325 Pfam No apical meristem (NAM) protein 9 133 IPR003441 GO:0003677|GO:0006355
Phac4g02085 325 SUPERFAMILY NAC domain 4 154 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02085 Phac-Chr4 47220080 47223183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02085 4 325 NAC Transcription Factor Family AT3G18400 56.757 1.80e-111 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac4g02085 NAM 2.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02085 - - pvu:PHAVU_004G156700g 615.535