Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02076 ATGGCTGAATTCACAGAAAATTTGCAACTTCAAAGCATTAGACCCTCTTCCTTTCCCTTCTTAGACATTGATCCAAGCATGGAACTTTTGAATCAATTCATTGGGATGAACCAACATGTCATAGACAACTCAAACTTGACTATGCACAACTTGATGCCATTCTCCTGTGACACCTTCTTGGGCCCTCAGGAACCTGAGTTTCCAGGAAACTTGGAAGAAAATTTCCCTGCCCTTGTTCATCATGTCAACCACAATGCACTTCCTGTTTCCCTCCCCATTTTCCAAGCAGAAAATAAGATCCATGAGGGTAAAAAGAGAAAATCAATGGATCTTCCCGAGACCAGTTCGGCTAACTCTACTCCTGCAGTTTCTGAAAGTGGAATCAAGAGAAAACATAGTTCTGGCAGAGGAAAGAGAGCAAAAAGCAATGTGACAGAAGAGGAGAAAGCAAAGGAAGTGGTCCATGTGAGAGCCAGAAGAGGTCAAGCTACCGATAGTCATAGTTTAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAATTAAGGTGCTTACAGAATATTGTTCCAGGATGTTACAAGACCATGGGTATGGCAGTAATGTTGGATGAAATCATAAACTATGTGCAGTCCTTGCAGCATCAAGTAGAGGTGAGCGATCAAAATAAAAAATAA 675 0.4133 MAEFTENLQLQSIRPSSFPFLDIDPSMELLNQFIGMNQHVIDNSNLTMHNLMPFSCDTFLGPQEPEFPGNLEENFPALVHHVNHNALPVSLPIFQAENKIHEGKKRKSMDLPETSSANSTPAVSESGIKRKHSSGRGKRAKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEVSDQNKK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02076 224 SMART finulus 168 218 IPR011598 GO:0046983
Phac4g02076 224 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 101 217 IPR024097 GO:0006355
Phac4g02076 224 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 160 219 IPR036638 GO:0046983
Phac4g02076 224 Gene3D - 158 224 IPR036638 GO:0046983
Phac4g02076 224 MobiDBLite consensus disorder prediction 139 169 - -
Phac4g02076 224 MobiDBLite consensus disorder prediction 112 127 - -
Phac4g02076 224 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 212 IPR011598 GO:0046983
Phac4g02076 224 Pfam Helix-loop-helix DNA-binding domain 166 213 IPR011598 GO:0046983
Phac4g02076 224 MobiDBLite consensus disorder prediction 102 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02076 Phac-Chr4 47170467 47172433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02076 84 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 53.333 8.06e-42 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac4g02076 HLH 0.00013 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02076 - - gmx:100806942 397.897