Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02075 ATGGCTGAATTCACAGAAAATTTGCAACTTCAAAGCATTAGACCCTCTTCCTTTCCCTTCTTAGACATTGATCCAAGCATGGAACTTTTGAATCAATTCATTGGGATGAACCAACATGTCATAGACAACTCAAACTTGACTATGCACAACTTGATGCCATTCTCCTGTGACACCTTCTTGGGCCCTCAGGAACCTGAGTTTCCAGGAAACTTGGAAGAAAATTTCCCTGCCCTTGTTCATCATGTCAACCACAATGCACTTCCTGTTTCCCTCCCCATTTTCCAAGCAGAAAATAAGATCCATGAGGGTAAAAAGAGAAAATCAATGGATCTTCCCGAGACCAGTTCGGCTAACTCTACTCCTGCAGTTTCTGAAAGTGGAATCAAGAGAAAACATAGTTCTGGCAGAGGAAAGAGAGCAAAAAGCAATGTGACAGAAGAGGAGAAAGCAAAGGAAGTGGTCCATGTGAGAGCCAGAAGAGGTCAAGCTACCGATAGTCATAGTTTAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAATTAAGGTGCTTACAGAATATTGTTCCAGGATGTTACAAGACCATGGGTATGGCAGTAATGTTGGATGAAATCATAAACTATGTGCAGTCCTTGCAGCATCAAGTAGAGTTTCTTTCTTTGAAGCTTACTGCAGCAAGTACCTTTTATGACTTCAATTCCGAGACAGATGCTTTAGAAACAATGCAGGTACCTACTTCTAAAATTTTCTGGTCTTATTTAATGTAA 768 0.4062 MAEFTENLQLQSIRPSSFPFLDIDPSMELLNQFIGMNQHVIDNSNLTMHNLMPFSCDTFLGPQEPEFPGNLEENFPALVHHVNHNALPVSLPIFQAENKIHEGKKRKSMDLPETSSANSTPAVSESGIKRKHSSGRGKRAKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDALETMQVPTSKIFWSYLM* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02075 255 Pfam Helix-loop-helix DNA-binding domain 166 213 IPR011598 GO:0046983
Phac4g02075 255 SMART finulus 168 218 IPR011598 GO:0046983
Phac4g02075 255 MobiDBLite consensus disorder prediction 102 168 - -
Phac4g02075 255 FunFam transcription factor BEE 3-like 159 230 - -
Phac4g02075 255 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 160 228 IPR036638 GO:0046983
Phac4g02075 255 Gene3D - 162 224 IPR036638 GO:0046983
Phac4g02075 255 CDD bHLH_AtBPE_like 152 237 - -
Phac4g02075 255 MobiDBLite consensus disorder prediction 139 168 - -
Phac4g02075 255 MobiDBLite consensus disorder prediction 112 127 - -
Phac4g02075 255 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 212 IPR011598 GO:0046983
Phac4g02075 255 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 102 236 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02075 Phac-Chr4 47170467 47172433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02075 84 244 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 57.068 3.23e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac4g02075 HLH 0.00016 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02075 - - gmx:100806942 447.203