Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02073 ATGGCTGAATTCACAGAAAATTTGCAACTTCAAAGCATTAGACCCTCTTCCTTTCCCTTCTTAGACATTGATCCAAGCATGGAACTTTTGAATCAATTCATTGGGATGAACCAACATGTCATAGACAACTCAAACTTGACTATGCACAACTTGATGCCATTCTCCTGTGACACCTTCTTGGGCCCTCAGGAACCTGAGTTTCCAGGAAACTTGGAAGAAAATTTCCCTGCCCTTGTTCATCATGTCAACCACAATGCACTTCCTGTTTCCCTCCCCATTTTCCAAGCAGAAAATAAGATCCATGAGGGTAAAAAGAGAAAATCAATGGATCTTCCCGAGACCAGTTCGGCTAACTCTACTCCTGCAGTTTCTGAAAGTGGAATCAAGAGAAAACATAGTTCTGGCAGAGGAAAGAGAGCAAAAAGCAATGTGACAGAAGAGGAGAAAGCAAAGGAAGTGGTCCATGTGAGAGCCAGAAGAGGTCAAGCTACCGATAGTCATAGTTTAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAATTAAGGTGCTTACAGAATATTGTTCCAGGATGTTACAAGGTAGAGACATGTTTCCTTCAAAAGCTCCAATTGTGTGTTACTTCATGA 630 0.4159 MAEFTENLQLQSIRPSSFPFLDIDPSMELLNQFIGMNQHVIDNSNLTMHNLMPFSCDTFLGPQEPEFPGNLEENFPALVHHVNHNALPVSLPIFQAENKIHEGKKRKSMDLPETSSANSTPAVSESGIKRKHSSGRGKRAKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKVETCFLQKLQLCVTS* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02073 209 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 160 194 IPR036638 GO:0046983
Phac4g02073 209 Gene3D - 152 204 IPR036638 GO:0046983
Phac4g02073 209 MobiDBLite consensus disorder prediction 139 169 - -
Phac4g02073 209 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 209 IPR011598 GO:0046983
Phac4g02073 209 MobiDBLite consensus disorder prediction 112 127 - -
Phac4g02073 209 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 101 195 IPR024097 GO:0006355
Phac4g02073 209 MobiDBLite consensus disorder prediction 102 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02073 Phac-Chr4 47170467 47172433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02073 84 195 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 47.183 2.56e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02073 - - gmx:100806942 353.984