Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02072 ATGAGACTTGTCATGTCTACTCCTTCAAGCATTTGTTACAGTGAAGAAGATAATGAACTTAGAAGAGGGCCATGGAGTGTTGAAGAGGATGATCTTCTTGTCAATTACATTGCCAATCATGGAGAAGGGAGATGGAATTTGCTTGCTATACGTTCAGGATTAAGGAGAACAGGAAAGAGTTGCAGATTAAGGTGGTCAAAAAATTGCACAACAGCTGCAGGCAGAACAGACTATGAAATAAAGAACTATTGGAGAACAAGGATTAAACAAGCAAGATATGTGAAATTTCAGACACAGAGAACAACAAGATTTCTAGAATTTGTCAAGGGTCTACAGATGACAAGATATCTTCTTAAAGCACAAGAATCATCTCCTTCAGCCATGTCACTCCAAGACAAAGAAATTCCTCTCCTTTTTTATGGTGGTTCTCATTATTCATCATTTGGGATTGGGGTAACACCAAAAACACAAATCACTTGCCAGGGAGGTCTCAGTCATTTGAATCAGCATGAACAGAACTCAGACTCTGTACACAACAATGGTTCAAGCATTTCCAATTCAGCATTTGGGGCCTTAGATAACTATGATTTTGGCATCTGTTCATATGATGGTTACAACATAGATAACAATGCCTATGACATGGATTCCTTCAACCTGACAGCCACAGTGAATGCTGAGAATATGAAACTCCCAGTGATTGGTTACCAAATATCAGAAACCAATTAG 726 0.3871 MRLVMSTPSSICYSEEDNELRRGPWSVEEDDLLVNYIANHGEGRWNLLAIRSGLRRTGKSCRLRWSKNCTTAAGRTDYEIKNYWRTRIKQARYVKFQTQRTTRFLEFVKGLQMTRYLLKAQESSPSAMSLQDKEIPLLFYGGSHYSSFGIGVTPKTQITCQGGLSHLNQHEQNSDSVHNNGSSISNSAFGALDNYDFGICSYDGYNIDNNAYDMDSFNLTATVNAENMKLPVIGYQISETN* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02072 241 CDD SANT 24 65 IPR001005 -
Phac4g02072 241 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Phac4g02072 241 Gene3D - 14 73 - -
Phac4g02072 241 Pfam Myb-like DNA-binding domain 22 67 IPR001005 -
Phac4g02072 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 73 IPR017930 -
Phac4g02072 241 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 16 65 IPR044676 GO:0003700|GO:0006355|GO:0043565
Phac4g02072 241 SMART sant 21 71 IPR001005 -
Phac4g02072 241 SUPERFAMILY Homeodomain-like 20 84 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02072 Phac-Chr4 47155867 47157307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02072 17 124 MYB Transcription Factor Family AT1G68320 41.844 1.14e-27 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac4g02072 Myb_DNA-binding 1.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02072 K09422 - gmx:100778425 333.954