Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02071 ATGTACACATCAAGGAAGAAAATCCACAAAGATAAGGATGCTGAGCCAACTGAATTTGAGGAGTCAGTTGGACAGGCATTCTTTGATCTTGAAAATACTAACAATGAGCTGAAAAGTGATCTGAAAGATTTATACATAAATTCAGCCGTCCAAATAGATGTTTCTGGGAACCGCAAGGCTGTGGTTATCCATGTCCCCTACAGATTAAGGAAAGGATTCAGGAAGATCCATGTCAGGCTTGTGAGAGAACTTGAGAAGAAATTTAGCGGGAAGGATGTAGTCCTGATTGCCACCCGTAGGATATTGAGGCCACCAAAGAAAGGTTCAGCTGTTCAGCGTCCCCGCAGCCGCACACTCACTGCTGTGCATGAGGCAATGCTGGAGGACATTGTATTACCTGCTGAGATTGTTGGAAAGCGGGTTAGGTATAGAATTGATGGTTCCAAGATTATGAAGGTGTTTTTGGACCCCAAGGAGAGAAACAACACTGAATACAAGTTGGAAACTTTTGCTGCAGTATACAGGAAGTTTTCAGGCAAAGATGTTGTATTTGAATATCCTACAACCGAGGCTTAG 576 0.4306 MYTSRKKIHKDKDAEPTEFEESVGQAFFDLENTNNELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVVLIATRRILRPPKKGSAVQRPRSRTLTAVHEAMLEDIVLPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKFSGKDVVFEYPTTEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02071 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Phac4g02071 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Phac4g02071 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02071 Phac-Chr4 47152379 47154735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02071 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 76.440 1.19e-112 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02071 K02993 - gmx:100499757 369.007