Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02070 ATGACCTTATTCTCCTGGTTGTGCCCATGTTTCAGGAAGGGCGGCGCAACCTCCGACGCCGGCGGCGACCACCACGACGATCCCACCGAGCCGGGGGACTCCTTGGACCTGATCTTCGACCTCCACACTCTCCAACTCGCTACCAACTTCTTCAGCAGCCTCAACCAGCTAGGTCATGGAGGCTTTGGTCCTGTCTTCAAGGGAATGATGCCAAATGGTCAAGAAGTAGCGGTTAAGAAGCTGTCAATGGAATCTAGACAAGGAGTTAAAGAATTCACCAACGAAGTCATGCTATTACTCAGAATTCAGCACAAGAACTTGGTTACATTACTTGGTTGTTGTGCAGAAGGGCCTGAAAAGATGCTTGTCTATGAGTATCTACCTAACAAAAGCCTTGATCACTTTCTGTTTGATAAGAGAAAGTCTTCATCTTTGGACTGGGCAAAACGATTCAGAATAGTTACTGGTGTGGCAAGAGGACTTCTCTACCTGCATGAAGAGGCCCCAGAAAGAATTATACATAGGGACATTAAAGCTAGTAACATATTATTGGATGACAAGTTAGTTCCGAAAATTTCAGACTTTGGTTTGGCAAGGCTGTTTCCTGGGGAGGACACACACGTGCAGACATTTAAGATTTCCGGTACACATGGTTACATGGCTCCTGAATATGCATTGCGAGGATATCTGTCAGTGAAGACGGATGTTTTCAGTTATGGAGTTCTGGTCTTGGAAATAGTTAGTGGGAGAAAAAACCAAGATATGCGACTTGGGCCAGAAAAAGCAGATCTCTTGAGCTATGCATGGTCGCTTTATCAAGGAGGAAGGATAATGGAATTGATTGATCCAGCCCTCGGTAAATACAATGGAGACGAGGCAGCAATGTGCATTCAGCTAGGTTTGTTGTGCTGCCAATCAAGCATAATTGAAAGACCTGACATGAATGCTGTTCATCTCATGCTCTCAAGTGATTCCTTCACTTTGCCAAGACCAGGTAAACCAGGAATTCTAGGTCGTGCAGGACATTGGACTACAACTACATCTTCTGCTTTGACCAATACCAATCCTAGTAATACTACCAGGGTCTCAGGTGGTAGTGGTAGTTTTATAGAGGATTATTCTAGAAATTCTATATCTACCTCTTCTTTTGATGAAGGCAGATGA 1164 0.4459 MTLFSWLCPCFRKGGATSDAGGDHHDDPTEPGDSLDLIFDLHTLQLATNFFSSLNQLGHGGFGPVFKGMMPNGQEVAVKKLSMESRQGVKEFTNEVMLLLRIQHKNLVTLLGCCAEGPEKMLVYEYLPNKSLDHFLFDKRKSSSLDWAKRFRIVTGVARGLLYLHEEAPERIIHRDIKASNILLDDKLVPKISDFGLARLFPGEDTHVQTFKISGTHGYMAPEYALRGYLSVKTDVFSYGVLVLEIVSGRKNQDMRLGPEKADLLSYAWSLYQGGRIMELIDPALGKYNGDEAAMCIQLGLLCCQSSIIERPDMNAVHLMLSSDSFTLPRPGKPGILGRAGHWTTTTSSALTNTNPSNTTRVSGGSGSFIEDYSRNSISTSSFDEGR* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02070 387 ProSiteProfiles Protein kinase domain profile. 51 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02070 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Phac4g02070 387 SUPERFAMILY Protein kinase-like (PK-like) 36 321 IPR011009 -
Phac4g02070 387 SMART serkin_6 51 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02070 387 CDD STKc_IRAK 57 321 - -
Phac4g02070 387 Pfam Protein tyrosine and serine/threonine kinase 54 252 IPR001245 GO:0004672|GO:0006468
Phac4g02070 387 FunFam Cysteine-rich receptor-like protein kinase 2 26 126 - -
Phac4g02070 387 Gene3D Transferase(Phosphotransferase) domain 1 127 327 - -
Phac4g02070 387 FunFam Cysteine-rich receptor-like protein kinase 41 127 327 - -
Phac4g02070 387 MobiDBLite consensus disorder prediction 347 368 - -
Phac4g02070 387 Gene3D Phosphorylase Kinase; domain 1 25 126 - -
Phac4g02070 387 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 36 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02070 Phac-Chr4 47148095 47151772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02070 27 334 Receptor kinase-like Gene Family AT4G11490 50.968 1.15e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac4g02070 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02070 - - gmx:100790304 659.833