Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02064 ATGGCGACGCCGCTGACGGGACTGCAGCACATGGACGGCGGCGGCGGAGTGGCGGTGCTGTCGAATCCAGTGAGCAAGGTGGATTCCTCCGCCAATGGCGGCGGCGGCTTCGGCCGGTCGCTGTCGGAATCGCCAATTCTGATATTCTCGTTCTTCCATAAGGCGATTCGGAACGAGCTCGACGCGCTGCACCGATTGGCGATGGCGTTCGCCACCGGAAACTGCTCCGACATCCAGCCCCTCTTCCAACGCTACCGGTTCCTCAGATCGATGTACAAACACCACTCCAATGCTGAAGATGAGGTGATTTTCCCAGCTCTAGATATACGGGTAAAGAATGTAGCACAAACATATTCCCTTGAACACCAGGGTGAAAGTGAAATTTTTGAACATCTATTTGAGCTGTTAAACTCTTCCATCCATAATGTTGAAAGTTTCCCAAAGGAGTTAGCATCCTGCACAGGAGCTCTGCAGACATCAGTTAGTCAACACATGGCTAAGGAGGAGGAGCAGGTATTTCCACTGCTTCTTGAGAAGTTCTCCCTTGATGAACAGGCCTCTTTAGTTTGGCAGTTTCTCTGTAGTATTCCTGTGAATATGATGACAAAATTTCTTCCGTGGCTCTCTACATCTATATCACCTGATGAATCTCAGGATTTGCGGAAGTGCTTAAGTAAGATAGTTCCAGAGGAAAAGCTTCTTCAAAAGGTTATTTTCACCTGGATGGAAGGGAGAAGTCGTGCTAACAACACAGTTGAAAATTGTGTAGATCATTCTCAGGTGCGATGTAGTCGTAATCCTTTAACCCATCAGAATGGGAAAATAAAATGTGCATGTGAGCCCACAGCAACTGGGAAAAGGAAATATTCCACGTGTATCATAGATGTTTCTGATACCATGACAACACATCCTATAGATGAAATATTGTTCTGGCATAATGCGATAAAGAAAGAGTTAAATGAGATAGCAGCACAGACCAGAAAGATACAACTCTCTGGAGATTTTACTAACCTGTCAGCTTTCAATGAAAGGTTGCAATTCATTGCTGAAGTTTGCATATTTCACAGTATTGCTGAGGACAAGGTTATTTTTCCAGCAGTAGATGGAAAATTTTCTTTCAGTAAAGAGCATGCTGAAGAAGAAAGCCAATTTAATGACTTTCGTTCTTTAATTGAAAGTATTCAAAGTGAAGGAGCAACATCTAGTTCAGAAACTGAATTTTATTCAACATTGTGTTCACATGCTGATCATATATTGGAAACAATACAGAGGCATTTCCATAATGAAGAAGTTCAGGTTCTTCCTCTTGCACGGAAGCACTTTAGCTTCAAAAGGCAACGTGAACTTCTCTATCAAAGCTTATGCATGATGCCATTGAAGTTGATTGAGCGTGTCCTGCCATGGTTGACTAGTTCATTAACTGAAGATGAAGCGCAGATGTTTTTGAAAAACATGCAATTGGCAGCTCCATCAATAGATACTGCTCTAGTCACACTTTTCTGTGGTTGGGCTTGCACGGCTCGTAAAGATGGTCTGTGTTTGTCTTCTAGTGTGTCAGGCTGCTGTCCTGCCCAGCGAATTACTGATATTGAAGAAAATATTGTTCAATCTTCCTGTCCTGCTTCTGCATTGTCTGATAGAGATTGCTCAATATTAGCTGAATCAGATGGGACCCAACAAAGATCAGTCAAGCGAAACATACAGGAGGTGCACAATGAAGATGTCTCTGAAATTTCAGAAAGTGAAAGTACTCAGAAACAATGTTGTAGTTCGCGGTCTTGTTGTGTGCCAGCTTTAGGAGTCAGCAGGAACAATTTGGGGCTGGGTTCACTCACTACAACCAAGTCCTTACGCTCTTTGTCCTTCACTGCTTCTGCCCCGTCCATTAATTCTAGTCTTTTCATCTGGGAAACTGACAACAGCTCAAGTGATGTTGGCTCTACAGAAAGACCAATAGATACTATATTTAAATTCCATAAAGCCATACGCAAAGACTTGGAGTATTTAGACATTGAATCTGGAAAGCTTTCTGATGGTGATGAAACAATTATTCGGCAATTTAGTGGAAGATTCCGGCTTTTGTGGGGTTTATATAGAGCTCATAGTAATGCTGAAGATGATATAGTATTTCCTGCACTCGAATCCAAAGAGGCACTTCATAACGTCAGCCACTCTTATACCCTGGATCATAAGCAGGAGGAAAAATTATTTGAAGATATTTCCTGTGTTCTTTCTGAACTTTCTGTCCTTCATGAAGTCTTGGTGAGAACCCCTATGTCAGAAGATTTAAGTGAAAATAGTTTTGCAATTCCTGATGCCAATGATAGGGATAATATAAAAAAGTACAACGAGCTTGCAACTAAGCTTCAAGGGATGTGCAAATCTATTAGAGTAACCCTGGATCAGCATATTTTTAGAGAAGAGCTTGAGCTCTGGCCACTATTTGGAAAGCATTTCACTGTGGAAGAACAAGATAAGATAGTTGGCCGGATAATTGGAACTACAGGTGCTGAAGTTCTCCAATCAATGTTACCATGGGTAACTTCTGCGCTTACACAGGATGAACAGAGCAAAATGATGGACACATGGAAACAGGCAACCAAAAACACCATGTTCAATGAATGGCTAAATGAATGCTTGAAAGAAAGTCCTGTATCTACAACACAGGCAGAAGCTTCCGAGCGTAGCACTTCTCAAAGAGGTGGTGATTATCAGGAAAGCTTGAACCTGAATGATCAGATGTTCAAGCCAGGTTGGAAAGACATTTTCCGGATGAATCAGAATGAACTTGAGTCAGAAATCCGGAAGGTCTATCGTGACTCAACTCTTGATCCAAGGAGAAAGGCATATCTTGTGCAGAATCTAATGACAAGTCGCTGGATAGCTGCCCAACAGAAGTTACCTAAGGCTCCATCTGGGGAATCATCCAGTAAACAAATAGAAGGATGCTCACCATCTTTTCGGGACCCAGAGAAACAAATATTTGGTTGTGAGCACTATAAGCGAAATTGCAAGCTTCGAGCTGCTTGTTGTGGCAAGTTATTTACTTGCAGATTTTGTCATGACAATGCAAGCGACCACTCAATGGATAGAAAAGCAACAATGGAAATGATGTGTATGCGGTGCCTTACTATACAGCCTGTTGGGTCTGTATGCATATCTCCTTCATGTGATGGACTTACAATGGCAAAGTACTATTGCAACATTTGCAAATTCTTTGATGATGAAAGGAATGTTTATCACTGCCCATTTTGCAATATATGCCGTGTTGGACAAGGGCTTGGAATTGATTATTTTCATTGTATGAAATGCAATTGTTGCCTGGGGATAAAATCAGCCTCTCATAAGTGCCTGGAGAAAGGTTTAGAAATGAACTGCCCAATTTGCTGTGATGACTTGTTCACATCAAGCGCAACAGTGAGAGCTTTACCATGTGGACATTACATGCATTCATCTTGCTTTCAGGCATACACTTGTAGTCACTACACGTGTCCAATCTGCAGCAAATCATTGGGAGATATGGCGGTTTACTTTGGTATGCTCGATGCTTTATTGGCCGCTGAGGAGCTTCCTGAAGAGTACCGGGACCGCTATCAGGATATACTCTGCCATGACTGTGACCGAAAGGCCACTTCACGCTTCCACTGGCTATATCACAAATGTGGATCTTGTGGCTCATACAATACCCGGGTAATCAAGAGTGAGGCAACAAATTCTAGCTGCCTTTAG 3729 0.4248 MATPLTGLQHMDGGGGVAVLSNPVSKVDSSANGGGGFGRSLSESPILIFSFFHKAIRNELDALHRLAMAFATGNCSDIQPLFQRYRFLRSMYKHHSNAEDEVIFPALDIRVKNVAQTYSLEHQGESEIFEHLFELLNSSIHNVESFPKELASCTGALQTSVSQHMAKEEEQVFPLLLEKFSLDEQASLVWQFLCSIPVNMMTKFLPWLSTSISPDESQDLRKCLSKIVPEEKLLQKVIFTWMEGRSRANNTVENCVDHSQVRCSRNPLTHQNGKIKCACEPTATGKRKYSTCIIDVSDTMTTHPIDEILFWHNAIKKELNEIAAQTRKIQLSGDFTNLSAFNERLQFIAEVCIFHSIAEDKVIFPAVDGKFSFSKEHAEEESQFNDFRSLIESIQSEGATSSSETEFYSTLCSHADHILETIQRHFHNEEVQVLPLARKHFSFKRQRELLYQSLCMMPLKLIERVLPWLTSSLTEDEAQMFLKNMQLAAPSIDTALVTLFCGWACTARKDGLCLSSSVSGCCPAQRITDIEENIVQSSCPASALSDRDCSILAESDGTQQRSVKRNIQEVHNEDVSEISESESTQKQCCSSRSCCVPALGVSRNNLGLGSLTTTKSLRSLSFTASAPSINSSLFIWETDNSSSDVGSTERPIDTIFKFHKAIRKDLEYLDIESGKLSDGDETIIRQFSGRFRLLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYTLDHKQEEKLFEDISCVLSELSVLHEVLVRTPMSEDLSENSFAIPDANDRDNIKKYNELATKLQGMCKSIRVTLDQHIFREELELWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQSKMMDTWKQATKNTMFNEWLNECLKESPVSTTQAEASERSTSQRGGDYQESLNLNDQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLMTSRWIAAQQKLPKAPSGESSSKQIEGCSPSFRDPEKQIFGCEHYKRNCKLRAACCGKLFTCRFCHDNASDHSMDRKATMEMMCMRCLTIQPVGSVCISPSCDGLTMAKYYCNICKFFDDERNVYHCPFCNICRVGQGLGIDYFHCMKCNCCLGIKSASHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSSCFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRYQDILCHDCDRKATSRFHWLYHKCGSCGSYNTRVIKSEATNSSCL* 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02064 1242 MobiDBLite consensus disorder prediction 883 905 - -
Phac4g02064 1242 Pfam Hemerythrin HHE cation binding domain 53 176 IPR012312 -
Phac4g02064 1242 Pfam Hemerythrin HHE cation binding domain 651 814 IPR012312 -
Phac4g02064 1242 Pfam Hemerythrin HHE cation binding domain 303 437 IPR012312 -
Phac4g02064 1242 SUPERFAMILY CHY zinc finger-like 989 1054 IPR037274 GO:0008270
Phac4g02064 1242 Gene3D nmb1532 protein domain like 44 194 - -
Phac4g02064 1242 Gene3D nmb1532 protein domain like 300 453 - -
Phac4g02064 1242 Gene3D nmb1532 protein domain like 647 890 - -
Phac4g02064 1242 MobiDBLite consensus disorder prediction 966 985 - -
Phac4g02064 1242 Pfam Ring finger domain 1125 1167 IPR001841 -
Phac4g02064 1242 CDD Hr-like 653 813 - -
Phac4g02064 1242 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1120 1170 IPR013083 -
Phac4g02064 1242 Gene3D - 1197 1238 - -
Phac4g02064 1242 MobiDBLite consensus disorder prediction 969 983 - -
Phac4g02064 1242 SUPERFAMILY RING/U-box 1123 1178 - -
Phac4g02064 1242 CDD Hr-like 306 435 - -
Phac4g02064 1242 CDD RING-H2_Pirh2-like 1125 1168 - -
Phac4g02064 1242 SMART ring_2 1126 1167 IPR001841 -
Phac4g02064 1242 FunFam Zinc finger protein-related isoform 1 1121 1170 - -
Phac4g02064 1242 ProSiteProfiles Zinc finger RING-type profile. 1126 1168 IPR001841 -
Phac4g02064 1242 ProSiteProfiles Zinc finger CTCHY-type profile. 1062 1125 IPR017921 -
Phac4g02064 1242 ProSiteProfiles Zinc finger CHY-type profile. 990 1059 IPR008913 GO:0008270
Phac4g02064 1242 SUPERFAMILY Zinc hairpin stack 1063 1119 IPR037275 -
Phac4g02064 1242 CDD Hr-like 48 174 - -
Phac4g02064 1242 Pfam Zinc-ribbon 1173 1230 IPR039512 -
Phac4g02064 1242 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 694 1238 - -
Phac4g02064 1242 Pfam CHY zinc finger 997 1072 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02064 Phac-Chr4 47114004 47124002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02064 1 1241 C2H2 Transcription Factor Family AT3G18290 66.059 0.0 1696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02064 K16276 - gmx:100791354 2334.3