Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02062 ATGGCGGCGAAAAGATTGCTCAATGATTCTGAACCAAATCCTGAAAAGCCAGACGACAAACGGACGAGAAATAACACTGCTAGACCTTCTTTTGCTTCTGTAATTGGAGAAGTGGTCATGGTAAATAACTTGGAGCATCTTTTCACTGCCATGGAACCTGTGCTTAGAAGAGTGGTGAGTGAGGAAGTTGAGCGAGGTTTGAGACAGTGGTCACTCTCCCATTCTAGGTCTCCTTCATTGAGACTTCGAGCAATGGAGCAGCCATCAAGCTTGCAACTACGGTTCAACAAGAGGCTTTTCCTTCCAATTTTCACAGGTAGCAGGATTCTTGACTTTGATGAGGACCCCATCAGCATAGTTCTGATGGAAAAAAGCAACAACAACCAAATGGTCCGCACAAGTCTCCCACATGCCATGAAGCTGGAGATTGTGGTTCTTGATGGAGATTTTACTCCTGAAAACGAGGATTGGACGAGTGAGGAATTCAACAGACACATATTGAAGGAGAGAGATGGGAAGAGACCTTTACTTGCAGGAGAATTGAACTTGATCATGCGAGATGGAATTGCACCAACTGGGGACATGGAATTCACAGATAACTCTAGCTGGATTCGCTGCAGGAAGTTCAGAGTTGCAGTGAGGGTAGCACCAGGAAGTACTCAAGGAGTTCGGATTCGTGAAGGAATGACTGAAGCATTTGTTGTCAAGGATCACCGTGGAGAATTGTACAAAAAACACTACCCTCCAAAGCTTCACGACGAAGTGTGGCGCCTGGAAAAGATCGGTAAAGATGGAGCTTTCCACAGAAAGTTGTCTTCTCAGGGCATAAAAACAGTCCAAGAATTTCTTAAACTAGCAGTTGTTGATGTTCTTAAGCTAAGAAATATTTTGGGCGTGTCGATGTCAGACAAGATGTGGGAAGCGGCAATGAAACATGCAATGAGTTGTGAGATGGGGAGCAAGTTGTACATTTATCATGGACCACACTTCACTATTTTTCTGGATCCAATTTGCAAATTAATTAGAGCAGAGGTCAATGGACAGACATTTTCAAACAGAGATCAAATTCCCCATTTGAACAAGGCCTATATAGACAAATTGGTGAGAGAAGCATATGCGAAATGGCCTAACTTGGAGGAGATAGATGGGGTTCTGAACGATAACTTTGCTGTGCTAACCCAAGGTGATCAACCTTCTGCATCAGTAGTGACATATGATCAGAATCATTATTACAGTGAGAAATCTGGAAGCTATGTTGCAAATAACAACACACAAATGGGATGCGAGTGGTCACTGAATCAACCCTACAGCACAGAACCGTTTGGTAATGACTTTCCTTTTAGTTTCTCAGCAACACAGACAGATGGAGACATGACCGCTTCAGGTTCTAGCTCTGTGGGTGTTGATGGAGCCACAACAAGGCACAACTAG 1431 0.4375 MAAKRLLNDSEPNPEKPDDKRTRNNTARPSFASVIGEVVMVNNLEHLFTAMEPVLRRVVSEEVERGLRQWSLSHSRSPSLRLRAMEQPSSLQLRFNKRLFLPIFTGSRILDFDEDPISIVLMEKSNNNQMVRTSLPHAMKLEIVVLDGDFTPENEDWTSEEFNRHILKERDGKRPLLAGELNLIMRDGIAPTGDMEFTDNSSWIRCRKFRVAVRVAPGSTQGVRIREGMTEAFVVKDHRGELYKKHYPPKLHDEVWRLEKIGKDGAFHRKLSSQGIKTVQEFLKLAVVDVLKLRNILGVSMSDKMWEAAMKHAMSCEMGSKLYIYHGPHFTIFLDPICKLIRAEVNGQTFSNRDQIPHLNKAYIDKLVREAYAKWPNLEEIDGVLNDNFAVLTQGDQPSASVVTYDQNHYYSEKSGSYVANNNTQMGCEWSLNQPYSTEPFGNDFPFSFSATQTDGDMTASGSSSVGVDGATTRHN* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02062 476 MobiDBLite consensus disorder prediction 452 476 - -
Phac4g02062 476 Pfam Calmodulin binding protein central domain 251 316 IPR046830 -
Phac4g02062 476 MobiDBLite consensus disorder prediction 9 25 - -
Phac4g02062 476 MobiDBLite consensus disorder prediction 1 27 - -
Phac4g02062 476 Pfam Calmodulin binding protein C-terminal domain 321 381 IPR046829 -
Phac4g02062 476 PANTHER OS02G0177800 PROTEIN 1 441 IPR012416 GO:0005516
Phac4g02062 476 Pfam Calmodulin binding protein-like N-terminal domain 91 238 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02062 Phac-Chr4 47084930 47089213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02062 7 445 Calmodulin-binding Proteins AT5G57580 43.049 8.20e-112 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02062 - - gmx:100803213 710.679