Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02060 ATGAGAAGAAGAACGATAATGGATTATAGGCATAATCTCATCCACACCACACTCACCCTCTCTTTCTTCCTCTTCATCGCTTTCCCACACTCACACTCTCAACCACCGCTACCGCCACCGCCACCGCCACCGCTTTGTGCTCAACAGTCATACATGTGCAACATAGAAGTGTCCTCCATCCTCCATCCTTTCTGGGAACAGAGTCCAACGTCTCAATGTAACGGCGCCCACCCATCATCCCAGCTCATCTGCTATGCTCGTTATGAACATCAAAATTTCACGGTGAAGGATATCGAGTACACCAATCACACCATGACAGTGGTGCCAACAGACACTGTCAAAGATGTTTGTTCTAATGATTTTTTGATGAGTTACGTGAAGTTGAACAACACTGTGTTAGAGTATTACGCTTCAGTGCACAACGTCACCGTATTCTTCGATAGTTGTCCTCTTGACATCCCAAAATTCCCTTCAAAACGCAAATGGAGGTGCGGGGATGGTGTGTATTATTTTGAGGAGGCATACAAGGAGGATGATCTGGTGAAGGAATACCCACTGCTTAAGGATTGCAAGGACCGTTTGAGGCTGCCCACTAAGGCTCCTCTGGATGATTATGATGATAGTGATGATGGAGCTGGAGTTCTGCAACAAGCTTTGAATGATGGGTTTGGGCTCTACTATGATGTTCCTCAACATTGCAGAAGATGCACCGAAAGTAACTGCGGGATCAATGGTTACGATGAACATGTAGTTTCATGCGAATACTATTGCCCAGATCAACACTGTTCTCCTCCCAGTAAAAGTCTTTCAAGTGCAGCAATGGGAGTATGCATGATATGCCTCATAATAGGTTGTAGAAAAAACATGTCATCAATAGGAAAGGTAAAACTTCGGATGACTAGTGAGCAAGATATTGAAGTATTCTTAAATGATCATGGAACTCTAGCACAAAAGAAATATAAATTTTCAGAAGTTAAGAAGATGACCAACAACTTCAGAGTTAAACTGGGTGAAGGTGGGTTTGGTGTTGTATACAAAGGAGAGATACACAATGGTTACCATGTGGCTGTAAAAATATTAAGGGCATCAAAAGGAAATGGCAAAGACTTTATCAATGAGGTTGCAAGTATTAGTAGAACTTCTCATGTTAATGTTGTTCAACTTCTTGGGTTTTGTTTGGAAGGAAAGAAGAAAGCCCTTATTTATGAATTCATGCCTAATGGTTCCCTCGACAAGTTTATTGGTAATAAGGAACTAAAAAGCACTTCGTCATTGAGTTGGGATAATATGTTACAGATTGCAAAAGGGATAGCCAAAGGATTAGACTACTTGCACAAGGGATGCAATACTCGAATTTTACATTTTGATATAAAACCACATAACATTCTTTTGGATGAAAACTTTTGTCCCAAGATATCAGATTTTGGGCTTGCAAAACTTTGTCCTGGGAAAGAGAGCACAATTTTGGTTTCAGATGCTAGAGGAACAATAGGATATGTAGCTCCAGAAGTGTGCAACAAACATTTTGGTGGAGTTTCACAAAAATCTGATGTGTACAGCTATGGAATGATGCTACTAGAAATAGTGGGGGTGAGGACCAATATTAATGCAGAAGTCACTCAAACAAGTGAATACTTCCCAGATTGGATATACCGCAAGCTGGAGCATGACCAAGATTTGAGATTTGGAATAATAACCATAGAAGAAAAAGAGATAGAAAGGAGAATGATTACAGTTAGTTTGTGGTGCATTCAAACGTTTCCAAAGGATAGACCTACTATGAGTAGAGTAATAGAAATGTTAGAAGGCAACATGAATTCCGAGGAAATGCCTCCAAAACCTATTCTTTCTTCTCCCACCACTAGATTGATCCACACCACACTCACCCTCTCTTTCTTCCTCTTCCTCGCTTTCCCACACTCCCACTCTCAACAACCGCTACAGTCACCAATATCGTCACCAATACCGTCACCGCTACCGTCACCGCCACCGCCACTGCCACCGACACCACCACCGCCACCGCCATCGCCACCGCTACCGCTTTGTGGTCAACAGTCATACCAGTGCAAAATAAGCGTGTCCGCCATCCTGGATTATTTCTGGGAAGAGAGTCCAGCATCTCAATGTAACGGCGGCCACCAATCATCCCTGCTCAGCTGCTATGCTAGTTATGCATATCAAAATTTCACGGTGAAGGATATCGACTACACCTCTTACACCATGACAGTGGTGCCAACAGACACTGTCAACGATGTTTGTTCTTATTACGATCTTTTTAAGATTTACGATTACTTGAACAACACTCTGTTACAGTATTACGCTTCAGTACACCGCGTCACCTTATTCTCCGATTGTCCTCATCACATCCCGAATTTCCCTTCAAAACGCAACTTTAAGTGCTGGAAGTCTGTGTATTATTTTGAGGAGGGATGGGAGGAGGATCTGGTGAAGGAATACCCACTGCTTAAGGATTGCAAGGGGCGTTTGGGCCTGCCCACTGCCTCTCCTCTGGATGAATATGATGATAGTGATGATGGAGCTGGAGTTCTGCAACAAGCTTTGAATGATGGGTTTGGCGTCCACTACGGCGTTCCTCAAGATTGCAGAAGATGCAGCCGAAGTAACGGAAGTTGCTGGACCGACGGTTATGGTGAAGATATAGTTTCATGCCAATACTATTGTTCAGATCAACAGTGTTCTGCTCCCAAAAGTAACAAAAGTAATGGTGTTGTAGGTTCAGCAATTGCAGGAGTTTTAATATCAATTTCAATTCTATGTGCAAGATATAAGTCATCAACCTGGCTAGCGAGTTTTGGTCTAATTCCAAAAAGTAATCAAAATATTGAAGCATTCCTTAAAATTCATGACTCTCTAGCTTTAAAAAGATATAAATTATCACAGATAAAACAAATGACCAAGAACTTCAAAGAGAAGCTGGGACAAGGTGGTTTTGGTACTGTCTACAAAGGTAAGTTATTCAATGGTAGTCCTATTGCTGTAAAGATGTTGAGTGCATCGAAAGAAAATGGTGAAGAATTTATCAATGAGGTTGCTAGCATTATTAGAACTTCTCATGTTAACGTGGTCTCGCTTCTTGGATTTTGTTTGGAAGGTCGCAAGAGAGCTCTCATCTATGAATTTATGTCCAATGGTTCCCTTGACAAATTCATTTATAGAAAAAGTTGTGAATTGGTTTCACCTTTGAGTTGGGATATTATATATCAAATTGCAAGGGATATAGCTCGAGGTTTAGAATACTTGCACAAGGGATGCAATACTCGAATTGTTCACTTTGACATAAAACCACATAACATTCTTCTGGATGAGAATTTCTATGCAAAGATATCAGATTTTGGATTGGCAAAACTGTGTCCTAGGAATGAAAGTATTGTTTCCTTGTCAGATGCTAGAGGAACAATGGGGTATGTAGCTCCAGAAATGTGGAGTAGAAATCTTGGAAGAGCTTCACATAAGTCTGATGTTTATAGTTATGGAATGATGTTGTTAGAGATGGTGGGAGGAAGGAAGAACATTAATGCTGAAGCTAGTCATACAAGTGAGATATACTTTCCACACTGGGCATACAATAAGCTTGAGTTGGAGAATGATTTGAGACCAGATATGGTGATGACAACAGAAGAAAATGAGATTGCAAAGAGGTTGACCATTGTGGGTTTATGGTGCATTCAAACATTTCCTAATGATAGACCTACAATGAGCAGCGTGATAGATATGTTGGAAGGCACCATGGATTCCCTACAAATCCCACCCAAACCTTTGCTTTCTTCTCCCACTAGATCAATACCTTCATGTTTAAGCTCCATTGATGCTTGCAATAATCTGATAAGTTGTGGCCAAATAACAAACATCGGTTTTCCATTCTGGGGAAAGAACCGCCCAAAAGAGTGTGGCCACTCTCTGATGCAACTCATATGCGAAAATGAGACCATCTTCGTAACCATTAAGGATGTCCAGTACGAGGTTTTGGAAGCCAACCCAGAAAGCCATACTTTGAAAATAACTAGAGAAGATTACTTGCAAGACTTGTGCCAACCAAAACATGTCAGCACCAGCCTTGACACTCAGCTCTACGTTTATGACTCACCCTATAACAATCTTACCCTTTCCTATGGTTGCACTCCTTCATCAAACTCTTTGCCTCTAACCTTTATTCCCTGTAATGAAGCTTTGGGGGAAAACGTTTATTCTCAGATTGGGTCACTTCCTCTTGTGTCTTGCAAAACAAGTGTGGTTGTTCCGGTTCCTCTATCATTGGTGGAGATTAACGATTTCACCAAAGTACACGAGGCAATCACAGAAGGGTTTGTTGTGAGATGGATAGTAGGTGTTGAAGAATGTGAGAAGTGTGAAAGATCAGGTGGAGTATGCGGTATTGAACAGTCTTCACAGCAAACAACATGTTACTGCAGAGATGGACCTTGTCCTAATTTCTCACCAGATATCCAAGCATCTTCAGAAGCTTAG 4485 0.4138 MRRRTIMDYRHNLIHTTLTLSFFLFIAFPHSHSQPPLPPPPPPPLCAQQSYMCNIEVSSILHPFWEQSPTSQCNGAHPSSQLICYARYEHQNFTVKDIEYTNHTMTVVPTDTVKDVCSNDFLMSYVKLNNTVLEYYASVHNVTVFFDSCPLDIPKFPSKRKWRCGDGVYYFEEAYKEDDLVKEYPLLKDCKDRLRLPTKAPLDDYDDSDDGAGVLQQALNDGFGLYYDVPQHCRRCTESNCGINGYDEHVVSCEYYCPDQHCSPPSKSLSSAAMGVCMICLIIGCRKNMSSIGKVKLRMTSEQDIEVFLNDHGTLAQKKYKFSEVKKMTNNFRVKLGEGGFGVVYKGEIHNGYHVAVKILRASKGNGKDFINEVASISRTSHVNVVQLLGFCLEGKKKALIYEFMPNGSLDKFIGNKELKSTSSLSWDNMLQIAKGIAKGLDYLHKGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPGKESTILVSDARGTIGYVAPEVCNKHFGGVSQKSDVYSYGMMLLEIVGVRTNINAEVTQTSEYFPDWIYRKLEHDQDLRFGIITIEEKEIERRMITVSLWCIQTFPKDRPTMSRVIEMLEGNMNSEEMPPKPILSSPTTRLIHTTLTLSFFLFLAFPHSHSQQPLQSPISSPIPSPLPSPPPPLPPTPPPPPPSPPLPLCGQQSYQCKISVSAILDYFWEESPASQCNGGHQSSLLSCYASYAYQNFTVKDIDYTSYTMTVVPTDTVNDVCSYYDLFKIYDYLNNTLLQYYASVHRVTLFSDCPHHIPNFPSKRNFKCWKSVYYFEEGWEEDLVKEYPLLKDCKGRLGLPTASPLDEYDDSDDGAGVLQQALNDGFGVHYGVPQDCRRCSRSNGSCWTDGYGEDIVSCQYYCSDQQCSAPKSNKSNGVVGSAIAGVLISISILCARYKSSTWLASFGLIPKSNQNIEAFLKIHDSLALKRYKLSQIKQMTKNFKEKLGQGGFGTVYKGKLFNGSPIAVKMLSASKENGEEFINEVASIIRTSHVNVVSLLGFCLEGRKRALIYEFMSNGSLDKFIYRKSCELVSPLSWDIIYQIARDIARGLEYLHKGCNTRIVHFDIKPHNILLDENFYAKISDFGLAKLCPRNESIVSLSDARGTMGYVAPEMWSRNLGRASHKSDVYSYGMMLLEMVGGRKNINAEASHTSEIYFPHWAYNKLELENDLRPDMVMTTEENEIAKRLTIVGLWCIQTFPNDRPTMSSVIDMLEGTMDSLQIPPKPLLSSPTRSIPSCLSSIDACNNLISCGQITNIGFPFWGKNRPKECGHSLMQLICENETIFVTIKDVQYEVLEANPESHTLKITREDYLQDLCQPKHVSTSLDTQLYVYDSPYNNLTLSYGCTPSSNSLPLTFIPCNEALGENVYSQIGSLPLVSCKTSVVVPVPLSLVEINDFTKVHEAITEGFVVRWIVGVEECEKCERSGGVCGIEQSSQQTTCYCRDGPCPNFSPDIQASSEA* 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02060 1494 FunFam PR5-like receptor kinase 1048 1258 - -
Phac4g02060 1494 Gene3D Transferase(Phosphotransferase) domain 1 405 613 - -
Phac4g02060 1494 Gene3D Transferase(Phosphotransferase) domain 1 1048 1255 - -
Phac4g02060 1494 MobiDBLite consensus disorder prediction 646 679 - -
Phac4g02060 1494 SUPERFAMILY Protein kinase-like (PK-like) 316 602 IPR011009 -
Phac4g02060 1494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Phac4g02060 1494 CDD STKc_IRAK 979 1248 - -
Phac4g02060 1494 ProSiteProfiles Protein kinase domain profile. 330 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02060 1494 PANTHER RUST RESISTANCE KINASE LR10-RELATED 945 1263 IPR045874 GO:0004672
Phac4g02060 1494 MobiDBLite consensus disorder prediction 651 679 - -
Phac4g02060 1494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1095 1107 IPR008271 GO:0004672|GO:0006468
Phac4g02060 1494 SMART serkin_6 973 1232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02060 1494 SMART serkin_6 330 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02060 1494 FunFam PR5-like receptor kinase 405 613 - -
Phac4g02060 1494 FunFam serine/threonine-protein kinase PBS1-like 299 404 - -
Phac4g02060 1494 SUPERFAMILY Protein kinase-like (PK-like) 957 1247 IPR011009 -
Phac4g02060 1494 FunFam serine/threonine-protein kinase PBS1-like 943 1047 - -
Phac4g02060 1494 Pfam Wall-associated receptor kinase galacturonan-binding 1278 1341 IPR025287 GO:0030247
Phac4g02060 1494 Pfam Wall-associated receptor kinase C-terminal 817 895 IPR032872 -
Phac4g02060 1494 Pfam Wall-associated receptor kinase C-terminal 1410 1479 IPR032872 -
Phac4g02060 1494 Pfam Wall-associated receptor kinase C-terminal 182 259 IPR032872 -
Phac4g02060 1494 ProSiteProfiles Protein kinase domain profile. 973 1261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02060 1494 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Phac4g02060 1494 Gene3D Phosphorylase Kinase; domain 1 941 1047 - -
Phac4g02060 1494 Gene3D Phosphorylase Kinase; domain 1 290 404 - -
Phac4g02060 1494 Pfam Protein tyrosine and serine/threonine kinase 333 601 IPR001245 GO:0004672|GO:0006468
Phac4g02060 1494 Pfam Protein tyrosine and serine/threonine kinase 975 1246 IPR001245 GO:0004672|GO:0006468
Phac4g02060 1494 ProSitePatterns Protein kinases ATP-binding region signature. 979 1001 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02060 Phac-Chr4 47057718 47073985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02060 60 631 Receptor kinase-like Gene Family AT1G66910 39.088 1.53e-122 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac4g02060 PK_Tyr_Ser-Thr 7.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02060 - - vum:124821711 850.121