Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02059 ATGACCAACAACTTCACAGTTAAACTAGGTGAAGGTGGGTTTGGTGTTGTATACAAAGGAGAGATACGCAATGGGTACCAGGTGGCTGTGAAGATATTAAGGGCATCAAACGGAAATGGAAAAGACTTTATCAATGAAGTTGCCAGCATTAGTAGAACTTCTCATGTTAATGTTGTCCAACTTCTTGGGTTCTCTTTGGAAGGAAATAAGAAAGCCCTTATTTATGAATTCATGCCTAATGGTTCCCTTGACAAGTTTATTAGTAATAAGGGACTAGAAAGAACTCCTTCGTTGAGTTGGGGTAATCTATTGCAAATTGCAAAAGGTATAGCCAGAGGACTAGAGTACTTGCACAGGGGATGTAACATTCGAATTTTACATTTTGATATAAAACCACATAACATTCTTTTGGATGAGAACTTTTGTCCCAAGATTTCAGATTTTGGGCTTGCAAAACTTTGTCCTGGAAAAGAGAGCACAATTTTGGTTTCAGATGCTAGAGGAACAATAGGATATGTGGCTCCAGAAGTGTGCAACAAACATTTTGGTGGAGTTTCACAAAAATCTGATGTGTACAGCTATGGAATGATGCTACTAGAAATAGTGGGAGTGAGGACCAATACTAATGTAGAAACCACTCAAACAAGTGAATACTTCCCAGATTGGATATACCGCAAGCTGGAACAAGACCAAGATTTGAGAATTGGGATAATAACCACAGAAGAAAAAGAGATAGAAAGGAGAATGATTACAGTTAGTTTGTGGTGCATTCAAACGTTTCCAAAGGATAGACCTACTATGAGTAGAGTAATAGAAATGTTAGAAGGCAACATGAATTCTGAGGAAATGCCCCCAAAACCTATTCTTTGTTCTCCCACCACTAGATTGGTGCCAGAATGGACCACTAGTTCTTTGCACTCTGGATAG 927 0.3873 MTNNFTVKLGEGGFGVVYKGEIRNGYQVAVKILRASNGNGKDFINEVASISRTSHVNVVQLLGFSLEGNKKALIYEFMPNGSLDKFISNKGLERTPSLSWGNLLQIAKGIARGLEYLHRGCNIRILHFDIKPHNILLDENFCPKISDFGLAKLCPGKESTILVSDARGTIGYVAPEVCNKHFGGVSQKSDVYSYGMMLLEIVGVRTNTNVETTQTSEYFPDWIYRKLEQDQDLRIGIITTEEKEIERRMITVSLWCIQTFPKDRPTMSRVIEMLEGNMNSEEMPPKPILCSPTTRLVPEWTTSSLHSG* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02059 308 SMART serkin_6 3 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02059 308 FunFam PR5-like receptor kinase 78 286 - -
Phac4g02059 308 Gene3D Transferase(Phosphotransferase) domain 1 78 286 - -
Phac4g02059 308 Pfam Protein tyrosine and serine/threonine kinase 6 274 IPR001245 GO:0004672|GO:0006468
Phac4g02059 308 PIRSF ILK 3 283 - -
Phac4g02059 308 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Phac4g02059 308 SUPERFAMILY Protein kinase-like (PK-like) 7 275 IPR011009 -
Phac4g02059 308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Phac4g02059 308 ProSiteProfiles Protein kinase domain profile. 3 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02059 308 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 291 IPR045874 GO:0004672
Phac4g02059 308 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02059 Phac-Chr4 47051655 47052581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02059 1 292 Receptor kinase-like Gene Family AT5G38280 57.718 5.22e-117 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac4g02059 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02059 - - vum:124821711 551.977