Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02056 ATGACCAAGAACTTCACAGAGAAGCTGGGACAAGGTGGTTTTGGTAGTGTGTACAAAGGTCGTAAGAGAGCTCTAATATATGAATTTATGCCTAATGGTTCTCTTGACAAATTCATTTATAGAAAAAGTTGTGAAATCCTTTCACCCTTGAGTTGGGATATTATATATCAAATTGCAATGGATATAGCTCGAGGATTAGAATACTTGCATAAAGGATGCAACACTCGAATTGTTCACTTTGACATAAAACCACATAACATTCTTCTGGATGAGAATTTCTGTGCAAAGATATCGGATTTTGGGTTGGCAAAACTGTGTCCGAGGAATGAAAGTATTATTTCCTTGTCAAATGCTAGAGGAACAATGGGATATGTAGCTCCAGAAATGTGGAGTAGAAATCTTGGAAGTGTTTCGCACAAGTCTGATGTTTATAGTTATGGAATGATGTTGCTAGAGATGGTGGGGGGAAGGAAGAACATTAATGTTGAAGCCAGTCATACAAGTAAGATTTACTTTCCGCACTGGGCATACAATAAGCTTGAGTTGGACAATGATTTGAGACCAGATATAATGATGACAACAGAAGAAAGTGAGATTGCAAAGAGGTTGGGCATAGTGGGTTTATGGTGCATTCCAACATTTCCTAATGATAGACCTACAATGAGCAGCGTGATAGATATGTTGGAAGGCACCATGGATTCCCTACAAATCCCACCCAAACCTTTGCTTTCTTCTCCCACTAGATCAATTCCTGAATATTCTATTTCCTGA 771 0.3852 MTKNFTEKLGQGGFGSVYKGRKRALIYEFMPNGSLDKFIYRKSCEILSPLSWDIIYQIAMDIARGLEYLHKGCNTRIVHFDIKPHNILLDENFCAKISDFGLAKLCPRNESIISLSNARGTMGYVAPEMWSRNLGSVSHKSDVYSYGMMLLEMVGGRKNINVEASHTSKIYFPHWAYNKLELDNDLRPDIMMTTEESEIAKRLGIVGLWCIPTFPNDRPTMSSVIDMLEGTMDSLQIPPKPLLSSPTRSIPEYSIS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02056 256 SMART serkin_6 3 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02056 256 Pfam Protein kinase domain 23 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02056 256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
Phac4g02056 256 ProSiteProfiles Protein kinase domain profile. 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02056 256 FunFam PR5-like receptor kinase 30 240 - -
Phac4g02056 256 Gene3D Transferase(Phosphotransferase) domain 1 2 240 - -
Phac4g02056 256 PIRSF ILK 14 237 - -
Phac4g02056 256 PANTHER RUST RESISTANCE KINASE LR10-RELATED 21 245 IPR045874 GO:0004672
Phac4g02056 256 SUPERFAMILY Protein kinase-like (PK-like) 5 229 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02056 Phac-Chr4 47029434 47030350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02056 14 244 Receptor kinase-like Gene Family AT4G18250 58.228 5.99e-91 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac4g02056 Pkinase 4.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02056 - - vra:106756549 440.269