Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02055 ATGAGCACACTCACCCTCTCTTTCTTCCTCTTCATCGCTTTCCCACACTCTCAATCATCGCCACCGCCTTGTGCTCAACAGTCATACAACTGCAGCATAAGCGTGCCCGCCATCCTGGATCCTTTCTGGGAAGAGAGTCCAGCGTCTCAATGCAACGGCTCCGCTGCTATGCTCAGCTGCTATGCTCGTCATGAATATCAAAATTTCACGGTGAAGGATGTCGACAACACCACTCACACCATGACAGTGGTGCTAACAGACACTGTCAACGATGTTTGTTCTCCTGATTTTTTTCCGAGTTACGTGAACTTGAACAAGACTGTGTTAGAGTATTACGCTTCAGTGCACAACGTCACCGTGTTCTTCGATGGTTGTCCTCTTGACATCCCGAAATTCCCTTCAAAACGCAACTTGACGTGCGGGGATTCTATGTATTATTTTGAGGAGGGATGGGAGGATGATCTGGTGAAGGAATACCCACTGCTTAAGGATTGCAAGTGGCGTTTGAGGCTGCCCACTGCGGCTCCTCTGGATCATTATGATGATAGTGATGATGGAGCTGGAGTTCTGCAACAAGCTTTGAATGATGGGTTTGGGGTGTACTATGGCGTTCCCCGAGATTGCAGAAGATGCAACGAAAGTAACGGAAGTTGCAGGAGCGGTGGTTATGAGGAAGATGTAGTTTCATGCCAATACTATTGCTCAGATCAACACTGTTCTGCTCCCAAAAGTAATGGTGTTGTAGGTTCAGCAATTGCAGGAGTGTTAATAATAATTTCAATTCTGTTTGTAAGATACAAGTCACCAACCTGGCTAGCGAATTTTGGGTTCACTCCAAGAAGTAATCAACATATTGAAGCATTCCTTAAAATTCACGACTCTCTAGCTCTAAAAAGATATACATTATCACAGGTAAAACAAATGACCAAGAATTACAAAGAGAAGCTGGGACAAGGTGGTTTTGGTATGGTGTACAAAGGTAAGCTATCCAATGGTAGTTCTATTGCTGTAAAGATATTGAGTGCATCGAAAAAAAATGGTGAAGATTTTATCAATGAGGTTTCTAGCATTAGTAGAACTTCTCATATTAATGTGGTCTCGCTTCTTGGATTTTGTTTGGAAGGTCCCAAGAGAGCTCTCATCTATGAATTTATGTCCAATGGTTCTCTTGATAAATTTATTTATAAAAAAAGACGTGAAGTGATTTCCCCCTTGAATTGGGATATTATATATCAAATTGCAAGGGATATAGCTCGAGGGTTAGAATACTTGCATAAAGGATGCAACACTCGAATTGTTCACTTTGACATAAAACCACATAACATTCTTCTGGATGAGAATTTCTTTGCAAAGATATCGGATTTTGGGTTGGCAAAACTGTGTCCCAAGAATGAAAGTATTATTTCCTTGTCAGATGCTAGAGGAACAATGGGGTATGTAGCTCCAGAAATGTGGAGTAGAAATCTTGGAAATGTTTCGCACAAGTCTGATGTTTATAGTTATGGAATGATGCTGTTAGAGATGGTGGGAGGAAGGAAGAACATTAATGCTGAAGCTAGTCGTACAAGTGAGATATACTTCCCACACTGGGCATACAATAAGCTTGAGTTGGACAATGATTTGGTACCAAATATGGTGATGACAACAGAAGAAAGTAAGATTGCAAAGAGGTTGGCCATAGTGGGCTTATGGTGCACTCAAACATTTCCTAATGATAGACCTACAATGAGCAACGTGATAAATATGTTGGAAGGCAACATGGATTCTCTACAAATCCCACCCAAACCTTTGCTTTCTTCTCCCACTAGATCACATAACGTAAATTTTCATAAAAAAGATCAACATGCTATAAAAGGATATTTATGGTTTTTTAATATTCTATATTTCTTAACAGGTGTTGTAAGTGTGGTAATTGGAGGGTTTTTCTTCATACTTTATTGTTTTAGACGTAAGTCTTCAAGTAGACAGGTCAAATCTTGTTTTACCACAAACAATGATTCAAATATTGAAGCATTCTTAAGAAATCATGGAGCTATAACACAGAAAAGATACAAATTTTCAGAAGTGAAGAAAATGACTAATTCATTCAAAGTCAAACTTGGTCAAGGTGGTTTTGGTGCAGTATATGAAGGAAAGTTGCTAACAGGTAGCCGTGTGGCTGTAAAACTACTAAATGTATCCAAAAGAAATGGTGAAGAATTTATCAATGAGGTTGCCAGCATCAGTAAAACATCTCATGTTAATATTGTTACACTTCTTGGATTTTGTTTGGAAGGTCGCAGAAAAGCTCTCATCTATGAGTTTATGGCTAATGGTTCTTTGGATAGGTTTATCTACAAAAGAGGACCAACAACAATTGTATCTTTGAGCTGGGAGAATTTATATCAAATTTCAATAGGAATAGCTCGAGGGTTGGAATACTTGCACAGGGGCTGCAATACTAAAATTTTACATTTTGACATCAAGCCGCATAACATTCTTTTAGATGAGAATTTTTGTCCTAAAATATCAGATTTTGGACTAGCAAAGTTGTGTCCCAGAAATGAAAGCATTATTTCCATGTCAGATGCTAGAGGAACAATGGGATATCTTGCTCCAGAAATGTGGAGTAGAAATTTTGGTGGAGTTTCACAAAAGTCTGATGTGTATAGTTATGGAATGATGCTACTAGAGATGGTAGGAGGAAGGAAGAACATTAATGTTGAAGCTAGTCGTACAAGTGAGATATATTTTCCACATTTGGCATACAAGAGACTTGAGTCGGATAATGATGTTAGATTGGATAAAGTGATTAATACAGAAGATAATGAGATTTCAAAGAGGATGACTATAGTGGGGTTATGGTGCATTCAAACACTCCCGAATGATAGACCTACAATGACTAGAGTGGTCGACATGTTGGAAGATAACATAAATTTCTTAGAAATGCCTCCAAAACCTTTGTTTTCTTCTCCTAGTAGATCAGAAACATAA 2973 0.3872 MSTLTLSFFLFIAFPHSQSSPPPCAQQSYNCSISVPAILDPFWEESPASQCNGSAAMLSCYARHEYQNFTVKDVDNTTHTMTVVLTDTVNDVCSPDFFPSYVNLNKTVLEYYASVHNVTVFFDGCPLDIPKFPSKRNLTCGDSMYYFEEGWEDDLVKEYPLLKDCKWRLRLPTAAPLDHYDDSDDGAGVLQQALNDGFGVYYGVPRDCRRCNESNGSCRSGGYEEDVVSCQYYCSDQHCSAPKSNGVVGSAIAGVLIIISILFVRYKSPTWLANFGFTPRSNQHIEAFLKIHDSLALKRYTLSQVKQMTKNYKEKLGQGGFGMVYKGKLSNGSSIAVKILSASKKNGEDFINEVSSISRTSHINVVSLLGFCLEGPKRALIYEFMSNGSLDKFIYKKRREVISPLNWDIIYQIARDIARGLEYLHKGCNTRIVHFDIKPHNILLDENFFAKISDFGLAKLCPKNESIISLSDARGTMGYVAPEMWSRNLGNVSHKSDVYSYGMMLLEMVGGRKNINAEASRTSEIYFPHWAYNKLELDNDLVPNMVMTTEESKIAKRLAIVGLWCTQTFPNDRPTMSNVINMLEGNMDSLQIPPKPLLSSPTRSHNVNFHKKDQHAIKGYLWFFNILYFLTGVVSVVIGGFFFILYCFRRKSSSRQVKSCFTTNNDSNIEAFLRNHGAITQKRYKFSEVKKMTNSFKVKLGQGGFGAVYEGKLLTGSRVAVKLLNVSKRNGEEFINEVASISKTSHVNIVTLLGFCLEGRRKALIYEFMANGSLDRFIYKRGPTTIVSLSWENLYQISIGIARGLEYLHRGCNTKILHFDIKPHNILLDENFCPKISDFGLAKLCPRNESIISMSDARGTMGYLAPEMWSRNFGGVSQKSDVYSYGMMLLEMVGGRKNINVEASRTSEIYFPHLAYKRLESDNDVRLDKVINTEDNEISKRMTIVGLWCIQTLPNDRPTMTRVVDMLEDNINFLEMPPKPLFSSPSRSET* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02055 990 FunFam PR5-like receptor kinase 769 978 - -
Phac4g02055 990 ProSiteProfiles Protein kinase domain profile. 694 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02055 990 CDD STKc_IRAK 700 968 - -
Phac4g02055 990 FunFam serine/threonine-protein kinase PBS1-like 663 768 - -
Phac4g02055 990 SMART serkin_6 310 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02055 990 SMART serkin_6 694 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02055 990 ProSiteProfiles Protein kinase domain profile. 310 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02055 990 SUPERFAMILY Protein kinase-like (PK-like) 678 967 IPR011009 -
Phac4g02055 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Phac4g02055 990 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Phac4g02055 990 Gene3D Transferase(Phosphotransferase) domain 1 769 975 - -
Phac4g02055 990 Gene3D Transferase(Phosphotransferase) domain 1 385 592 - -
Phac4g02055 990 FunFam PR5-like receptor kinase 385 595 - -
Phac4g02055 990 Pfam Protein kinase domain 313 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02055 990 Pfam Protein kinase domain 697 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02055 990 PANTHER RUST RESISTANCE KINASE LR10-RELATED 665 986 IPR045874 GO:0004672
Phac4g02055 990 SUPERFAMILY Protein kinase-like (PK-like) 293 584 IPR011009 -
Phac4g02055 990 Pfam Wall-associated receptor kinase C-terminal 157 236 IPR032872 -
Phac4g02055 990 Gene3D Phosphorylase Kinase; domain 1 655 768 - -
Phac4g02055 990 Gene3D Phosphorylase Kinase; domain 1 277 384 - -
Phac4g02055 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Phac4g02055 990 FunFam serine/threonine-protein kinase PBS1-like 280 384 - -
Phac4g02055 990 ProSitePatterns Protein kinases ATP-binding region signature. 700 722 IPR017441 GO:0005524
Phac4g02055 990 CDD STKc_IRAK 316 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02055 Phac-Chr4 47016845 47027474 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02055 628 982 Receptor kinase-like Gene Family AT1G66910 51.117 4.30e-113 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac4g02055 Pkinase 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02055 - - vra:106756549 853.203