Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02053 ATGCTTTATTGTTTTAGACGCAAGTCTTCAAGTAGACTGGTTAAATCTTGTTTTACCATAAACAATGATTCAAATATTGAAGCATTCTTAAGAAATCATGGAGTTGTGACACAAAAAAGATACAATTTTTCAGAAGTGAAAAAAATGACTAATTCATTTAAAGTCAAGCTTGGTCAAGGTGGTTTTGGTGTAGTATATGAAGGAAAGTTGCTCACAGGTAGTCGTGTGGCTGTAAAACTACTAAATGCATCCAAAAGAAATGGTGAAGAATTTATCAATGAGGTTGCCAGCATCAGTAAAACATCTCATGTTAATATTGTTACACTTCTTGGATTTTGTTTGGAAGGTCGCAAAAAAGCTCTCATCTATGAGTTTATGGCTAATGGTTCTTTGGATAGGTTTATCTACAAAAGAGGACCAACAACAGTTGTATCTTTGAGCTGGGAGAATTTATATCAAATTTCAATAGGAATAGCTCGAGGGTTGGAATACTTGCATAGGGGCTGCAATACTAAAATTTTACATTTTGACATCAAGCCGCATAATATTCTTTTAGATGAGAATTTTTGCCCTAAAATATCAGATTTTGGACTAGCAAAGTTGTGTCCCAGGAATGAAAGCGTTATTTCCATGTCAGATGCTAGAGGAACAATGGGATACCTTGCTCCAGAAATGTGGAATAGAAATTTTGGAGGAGTTTCGCAAAAGTCTGATGTTTATAGTTATGGAATGATGCTACTAGAGATGGTAGGAGGAAAGAAGAACATTATTGCTGAAGCTAGTCGTACAAGTGAGATATATTTTCCACATTTGGCATACAAGAGACTTGAGTTGGATAATGGTGTCAGACCGGATGAAGCGATAAATACAGAAGAAAATGAGATTTTAAAGAGAATAACTATAGTGGGGTTATGGTGCATTCAAACACTTCCCAATGATAGACCTACAATGACTAGAGTGGTCGATATGTTGGAAGGTAACATGAATTTCTTGAAAATGCCTCCAAAACCTTTTTTTTCTTCTCCTACTAGATCAGAAGCATAA 1044 0.3534 MLYCFRRKSSSRLVKSCFTINNDSNIEAFLRNHGVVTQKRYNFSEVKKMTNSFKVKLGQGGFGVVYEGKLLTGSRVAVKLLNASKRNGEEFINEVASISKTSHVNIVTLLGFCLEGRKKALIYEFMANGSLDRFIYKRGPTTVVSLSWENLYQISIGIARGLEYLHRGCNTKILHFDIKPHNILLDENFCPKISDFGLAKLCPRNESVISMSDARGTMGYLAPEMWNRNFGGVSQKSDVYSYGMMLLEMVGGKKNIIAEASRTSEIYFPHLAYKRLELDNGVRPDEAINTEENEILKRITIVGLWCIQTLPNDRPTMTRVVDMLEGNMNFLKMPPKPFFSSPTRSEA* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02053 347 PANTHER RUST RESISTANCE KINASE LR10-RELATED 22 341 IPR045874 GO:0004672
Phac4g02053 347 SUPERFAMILY Protein kinase-like (PK-like) 34 325 IPR011009 -
Phac4g02053 347 SMART serkin_6 51 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02053 347 FunFam serine/threonine-protein kinase PBS1-like 21 125 - -
Phac4g02053 347 Pfam Protein kinase domain 54 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02053 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Phac4g02053 347 FunFam PR5-like receptor kinase 126 336 - -
Phac4g02053 347 ProSiteProfiles Protein kinase domain profile. 51 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02053 347 ProSitePatterns Protein kinases ATP-binding region signature. 57 79 IPR017441 GO:0005524
Phac4g02053 347 Gene3D Transferase(Phosphotransferase) domain 1 126 332 - -
Phac4g02053 347 Gene3D Phosphorylase Kinase; domain 1 16 125 - -
Phac4g02053 347 CDD STKc_IRAK 57 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02053 Phac-Chr4 47002456 47003600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02053 22 339 Receptor kinase-like Gene Family AT4G18250 58.282 2.23e-125 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phac4g02053 Pkinase 4.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02053 - - pvu:PHAVU_004G155400g 612.453