Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02051 ATGCCTCATCCTCTTGTTCCACCTCCTTCTTCCCTCATCAACACCCTTTTATTCTTCTCACTCTTGTTCCCAACATATGTGTCTAGTGATGCTGAAGGGTACACAGCATGTGAACCTTTTAGCTGTGGGAAATTCAACGATATTAGCTACCCATTTTGGAGTAAGGACCGGCAGGAGTATTGTGGGCATCCAAAGTTCAAGCTTGATTGCCAACAAGACAACGTGACAATTGACATCATGTCACAGACATTCCAAGTCATTGACATGGATCAAGCATCTAAGGTTTTGGAGATTGCAAGGTTGGATTTATGGGCTGACCCTTGTACTAATGATTATGTCAATGTGAAGTTGGATCCTGATTTCTTTAGCTACACTTCTAATAATGATGAGTACACTTTGTTTTATGACTGCGGTTCTCTTGGATATACGTCTGGTAGTGTGGTTATTGAAGGAGCATTAGAATTTAATTGCCTCATAGATGGTGATCTTCGAGCTTCATACTTTGTCTTGAGTACTGAAGTGGCTAAGTTATCGAGTCAGGGGTGCAAGAATAACATCACTGTTTCTGTTCTAAGAGAGGCTGTGAAGGATGTTTCGCTCGTGGGAAATGTTCTGCAAAAAGGATTTGAGGTTGGATGGAGTGGTGTGAATGAAAACCAATGTGATGGTTGCTCAAGATCTGGTGGGAGATGTGGATACAATGCATCTATGGGTGGATTTATGTGTCTCTGCCCTAATCAGCAACCTGATGGTGAGTTTTGTAACAAAATCCTAGCAAAGTCTCCAGCAGCAACACCTAGAGTAACACCAGCAAAGTCACAGTTACCCCCTTACTCTCAAAATTTTCCAAAACAGTCTCCAGAGTCTCCAGATGCTCCGAGCAGTCTGAACGTGCGAAGGAAAATCGCTATAGCTGTTGGTTCAGCTGTAGTGGGAGCACTTATAGTGGGCATTGGCGTCTATCTTTTTATTCGTAGAAGGAAGAATAGTTATGTAATGTCATATACACAATCTCGGAGCCTCTCTTCTGATCCATCTTCAAAGGACACTGAGAAGGGAAGTCAAAGCTTCACTCAAAGCATTATACCTGGAGTTCACCTCTTCTCCTATGAAGAACTAGAAGTGGCCACGAATTACTTTGACTCAACTAAAGAACTAGGAGAAGGTGGCTTTGGGACAGTGTATTTTGGCAAACTGCGAGATGGGCGTTCTGTTGCAGTGAAGAGGTTGTATGAGAACAACTACAGGATAGTTGCACAGTTCATGAATGAAATCAAAATCCTCACTCGCATAGATCATCCAAATCTTGTGAAGTTATTCGGATGCACCTCTCGCCACAGCCGTGAACTTCTGCTTGTGTATGAGTACATTCCTAATGGAACTGTTGCAGATCATCTTCATGGTCATCTATCTAAACCTGGAACACTCCCTTGGCATATCAGAATGAATATAGCTGTGGAGACTGCAAGTGCACTGAAATTTCTTCATCTCAAAGGTATCATCCACAGAGATGTTAAAACCAACAACATTCTACTTGAAAGTAACTTCCGTGTGAAAGTGGCAGATTTTGGACTCTCTCGTCTTTTCCCACACCAAGCCACCCATGTTTCAACAGCTCCACAAGGGACTCCAGGTTATGTGGATCCGGAGTACCATGAGTGTTACCAGCTTACCAACAAAAGTGATGTGTATAGCTTTGGAGTGGTGCTGGTTGAGCTGATATCATCACTGCCTGCTGTTGACATCACAAGGCATAGACATGAAATCAATTTGGCCAACATGGCCATTAACAAGATTCACAATCAGACACTGCAAGAGCTTGTGGACAGAAACCTTGGTTTTGAATCAGATTTCAAGGTGAGGAAAATGATAAGTGGTGTGGCTGAGTTAGCATTTCAGTGCTTGCAGAGTTCCAAAGACATGAGACCTTCTATGGAAGAAGTGGTGGAGACTCTCAAGGATATTCAGAATGATGGCAAAAACAGAAGTCAGCCTGAGGTAATGGATATCTCAAGCACTTCTGATGATGTTGTGTTGCTGAAGGATGACCCTCCTCCACCATCACCTGATTCTAAAGCCGTGAGCAACACAACAACACCAAATACTTCTTCCTGA 2115 0.4293 MPHPLVPPPSSLINTLLFFSLLFPTYVSSDAEGYTACEPFSCGKFNDISYPFWSKDRQEYCGHPKFKLDCQQDNVTIDIMSQTFQVIDMDQASKVLEIARLDLWADPCTNDYVNVKLDPDFFSYTSNNDEYTLFYDCGSLGYTSGSVVIEGALEFNCLIDGDLRASYFVLSTEVAKLSSQGCKNNITVSVLREAVKDVSLVGNVLQKGFEVGWSGVNENQCDGCSRSGGRCGYNASMGGFMCLCPNQQPDGEFCNKILAKSPAATPRVTPAKSQLPPYSQNFPKQSPESPDAPSSLNVRRKIAIAVGSAVVGALIVGIGVYLFIRRRKNSYVMSYTQSRSLSSDPSSKDTEKGSQSFTQSIIPGVHLFSYEELEVATNYFDSTKELGEGGFGTVYFGKLRDGRSVAVKRLYENNYRIVAQFMNEIKILTRIDHPNLVKLFGCTSRHSRELLLVYEYIPNGTVADHLHGHLSKPGTLPWHIRMNIAVETASALKFLHLKGIIHRDVKTNNILLESNFRVKVADFGLSRLFPHQATHVSTAPQGTPGYVDPEYHECYQLTNKSDVYSFGVVLVELISSLPAVDITRHRHEINLANMAINKIHNQTLQELVDRNLGFESDFKVRKMISGVAELAFQCLQSSKDMRPSMEEVVETLKDIQNDGKNRSQPEVMDISSTSDDVVLLKDDPPPPSPDSKAVSNTTTPNTSS* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02051 704 Gene3D Phosphorylase Kinase; domain 1 350 456 - -
Phac4g02051 704 MobiDBLite consensus disorder prediction 658 704 - -
Phac4g02051 704 FunFam Wall-associated receptor kinase-like 20 457 665 - -
Phac4g02051 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
Phac4g02051 704 CDD TM_EGFR-like 302 329 - -
Phac4g02051 704 MobiDBLite consensus disorder prediction 272 293 - -
Phac4g02051 704 MobiDBLite consensus disorder prediction 265 294 - -
Phac4g02051 704 Pfam Wall-associated receptor kinase galacturonan-binding 37 99 IPR025287 GO:0030247
Phac4g02051 704 Pfam Wall-associated receptor kinase C-terminal 165 246 IPR032872 -
Phac4g02051 704 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
Phac4g02051 704 ProSiteProfiles Protein kinase domain profile. 380 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02051 704 SMART serkin_6 380 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02051 704 SUPERFAMILY Protein kinase-like (PK-like) 362 672 IPR011009 -
Phac4g02051 704 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 702 IPR044652 GO:0004672
Phac4g02051 704 Pfam Protein kinase domain 382 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02051 704 Gene3D Transferase(Phosphotransferase) domain 1 457 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02051 Phac-Chr4 46990370 47000562 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02051 293 704 Receptor kinase-like Gene Family AT1G25390 54.374 2.26e-145 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phac4g02051 Pkinase 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02051 - - gmx:100800873 983.4