Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02049 ATGGCCATTTATATGAACAACATAAATACAAACTTGAACGCCAAGTTGAAACATCCTCAGGTTTTGTTATACACAAAAAAATTTCTTCTGTTTATTTCCCTTGTTTTAGGAAAACTTGAGGATGGGCGTGAGATTACAATCCAGTGCTTCAACGAAGACAAGCACCACATATTGCAACAGTTTATCAATGAAACTACTATCCTAAACTACTTGCCTCACAAAAATATTGTGTCAATTTATGGGTGTGCTTCTCATCACGAGGAATCTATGCTAATCCATGAATACTTATCCAATGGAAATCTTGCTGCTCATCTTAAAAGTGAAGATGAAAACAGCACACTACCTTGGCTCACACGATTAGACGTAGCCATTGATATTGCAAATGCATTGGACTATCTTCACTTTTATGGCATCATCCACCGCAATGTGAAGTCCAGCAATATTCTCCTAGATGTGAACTTTTCTGCTAAACTTGCAAACCTTCATTTATCATGCAAGCTTCCTGATGGAGTTCCTGTGTATGCTGCCCATGTTACTAATGATATAATTGGAACATGTGGTTATATCGACCCAGATTATTTGACAAAAGGCCAGCTTAGTGTAAAAAATGATGTTTATAGCTTTGGGGTGGTGTTGTGTGAGCTTCTATCATCAAAGCTGGCAAAATACTGTTTTCTGAATGAGGAGGACAATCTTGCTATGCTTTTAAGAAGAAAAACTGAAAAGCAAGAGGTGGTGGAGGTGTTGGATCCAAGACTTGCCTTCCAATCTAACCTTAAGATCAAGAGGATGATGACTGCTACAGCTGAACTTGCAGTTTTGTGCATGCAGTGTCCACAAGAGTTAAGGCCAAACATGGAACAGGTGCTAGAGATTCTCAATGGCATAAAGGAAGGGAGAGATGAAACAAACACAACAAAAGTTTTGAAAATCTTCCACCATGCTGAACTTGAAGAAGCTACTAACAATTTTGATACTTGCCTTGGAAAGGGAGGCTATGGCACCGTGTACTATGGAAAACTTAAGGATGGACGAGAGGTTGCAATAAAATGTTTCCATGACGAGAGTGAGACAGAAAAGATCATTAAGCAATTCATGAAAGAAACTGAGATCTTGGTTTTGTTGCACCATACAAATCTGGTTCTACTTTATGGCCGCACTTCTCGCCATAGCAACAAACACATGCTAGTGTACGAGTACATCTCCAATGGCACTCTTTCTAAACATCTTCATGACTCTTCCTGTGGTAAACTACCATGGCATACTAGATTGAACATTGCCATCGAAACTGCAACTGCCTTGGTATATCTCCATGACTCAGGTATCATCCACCGAGATGTCAAAGGGAGTAACATTCTGTTGGATGAAAATTTTACTGTTAAAGTTGCAGATTTTGGATTCTCACGGTCTCTTCCAGATTATGTCACTCACGTTTCCACTATTCCAGTAGGAACTCGTGCTTACATAGATCCTGACTACTATGAATCGGGAAGAGTCAGTGACAAAAGTGATGTCTATAGTTTTGGGGTGGTCTTGTTTGAACTTATATCTTCCAACCCCCCAAGTTTAATGGAAGGCACAGATTATGTTACTCTTGCACAATTTGCAAAGAGGAAAATCTTGAACAAGGAATTAAACGCGGTAGTGGATCCAAGTTTTTGGTTTGGTGTAGACAGAAACATGATGGAAATGATAACAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCTAAGGAACTCAGACCATCCATGAAACAGGTGCTAGAGACCCTTGAGGGCATTAGGAAAGGAACATGGGGATTCAACCAGATAACATAG 1824 0.3991 MAIYMNNINTNLNAKLKHPQVLLYTKKFLLFISLVLGKLEDGREITIQCFNEDKHHILQQFINETTILNYLPHKNIVSIYGCASHHEESMLIHEYLSNGNLAAHLKSEDENSTLPWLTRLDVAIDIANALDYLHFYGIIHRNVKSSNILLDVNFSAKLANLHLSCKLPDGVPVYAAHVTNDIIGTCGYIDPDYLTKGQLSVKNDVYSFGVVLCELLSSKLAKYCFLNEEDNLAMLLRRKTEKQEVVEVLDPRLAFQSNLKIKRMMTATAELAVLCMQCPQELRPNMEQVLEILNGIKEGRDETNTTKVLKIFHHAELEEATNNFDTCLGKGGYGTVYYGKLKDGREVAIKCFHDESETEKIIKQFMKETEILVLLHHTNLVLLYGRTSRHSNKHMLVYEYISNGTLSKHLHDSSCGKLPWHTRLNIAIETATALVYLHDSGIIHRDVKGSNILLDENFTVKVADFGFSRSLPDYVTHVSTIPVGTRAYIDPDYYESGRVSDKSDVYSFGVVLFELISSNPPSLMEGTDYVTLAQFAKRKILNKELNAVVDPSFWFGVDRNMMEMITAVAELAFQCVQCPKELRPSMKQVLETLEGIRKGTWGFNQIT* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02049 607 FunFam Wall-associated receptor kinase 3 401 607 - -
Phac4g02049 607 SUPERFAMILY Protein kinase-like (PK-like) 37 295 IPR011009 -
Phac4g02049 607 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Phac4g02049 607 ProSiteProfiles Protein kinase domain profile. 1 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02049 607 Gene3D Phosphorylase Kinase; domain 1 19 95 - -
Phac4g02049 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Phac4g02049 607 SMART serkin_6 30 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02049 607 SMART serkin_6 322 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02049 607 Gene3D Transferase(Phosphotransferase) domain 1 98 296 - -
Phac4g02049 607 FunFam Wall-associated receptor kinase 3 96 312 - -
Phac4g02049 607 Pfam Protein tyrosine and serine/threonine kinase 42 292 IPR001245 GO:0004672|GO:0006468
Phac4g02049 607 Pfam Protein tyrosine and serine/threonine kinase 325 593 IPR001245 GO:0004672|GO:0006468
Phac4g02049 607 Gene3D Transferase(Phosphotransferase) domain 1 401 601 - -
Phac4g02049 607 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 308 600 IPR044652 GO:0004672
Phac4g02049 607 SUPERFAMILY Protein kinase-like (PK-like) 304 597 IPR011009 -
Phac4g02049 607 Gene3D Phosphorylase Kinase; domain 1 297 400 - -
Phac4g02049 607 ProSiteProfiles Protein kinase domain profile. 322 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02049 Phac-Chr4 46970974 46975397 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02049 309 597 Receptor kinase-like Gene Family AT1G25390 52.542 3.44e-91 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phac4g02049 PK_Tyr_Ser-Thr 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02049 - - vun:114181918 1065.06