Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02047 ATGAGAATGAAGTGTAATCTCTTTGAGTGCTGCTTCACTGGCACTTCTGACACATTTCCAAAGCAGAGTAAATGGAAAATCTTGCCCCACAAGAAACTTGCAAAAGTCACAGATAACTTCAATCAATCTCATTGTCTTGGAAAAAGAAGCTTTGCCACTGAATATTACGGAAAACTTGAGGATGGGCGTGAGATTACAATCCAGTGCTTCAACGAAGACAAGCACCACATATTGCAACAGTTTATCAATGAAACTACTATCCTAAACTACTTGCCTCACAAAAATATTGTGTCAATTTATGGGTGTGCTTCTCATCACGAGGAATCTATGCTAATCCATGAATACTTATCCAATGGAAATCTTGCTGCTCATCTTAAAAGTGAAGATGAAAACAGCACACTACCTTGGCTCACACGATTAGACGTAGCCATTGATATTGCAAATGCATTGGACTATCTTCACTTTTATGGCATCATCCACCGCAATGTGAAGTCCAGCAATATTCTCCTAGATGTGAACTTTTCTGCTAAACTTGCAAACCTTCATTTATCATGCAAGCTTCCTGATGGAGTTCCTGTGTATGCTGCCCATGTTACTAATGATATAATTGGAACATGTGGTTATATCGACCCAGATTATTTGACAAAAGGCCAGCTTAGTGTAAAAAATGATGTTTATAGCTTTGGGGTGGTGTTGTGTGAGCTTCTATCATCAAAGCTGGCAAAATACTGTTTTCTGAATGAGGAGGACAATCTTGCTATGCTTTTAAGAAGAAAAACTGAAAAGCAAGAGGTGGTGGAGGTGTTGGATCCAAGACTTGCCTTCCAATCTAACCTTAAGATCAAGAGGATGATGACTGCTACAGCTGAACTTGCAGTTTTGTGCATGCAGTGTCCACAAGAGTTAAGGCCAAACATGGAACAGGTGCTAGAGATTCTCAATGGCATAAAGGAAGGGAGAGATGAAACAAACACAACAAAAGGTATAATAAAGTCATTTTTTGTCCTGTTTCCTTGCTCATGGTTTTCTAGCTTCTGTGTGTTTTTGGTGTCAACAGACTGA 1062 0.3936 MRMKCNLFECCFTGTSDTFPKQSKWKILPHKKLAKVTDNFNQSHCLGKRSFATEYYGKLEDGREITIQCFNEDKHHILQQFINETTILNYLPHKNIVSIYGCASHHEESMLIHEYLSNGNLAAHLKSEDENSTLPWLTRLDVAIDIANALDYLHFYGIIHRNVKSSNILLDVNFSAKLANLHLSCKLPDGVPVYAAHVTNDIIGTCGYIDPDYLTKGQLSVKNDVYSFGVVLCELLSSKLAKYCFLNEEDNLAMLLRRKTEKQEVVEVLDPRLAFQSNLKIKRMMTATAELAVLCMQCPQELRPNMEQVLEILNGIKEGRDETNTTKGIIKSFFVLFPCSWFSSFCVFLVSTD* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02047 353 ProSiteProfiles Protein kinase domain profile. 40 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02047 353 Pfam Protein tyrosine and serine/threonine kinase 44 312 IPR001245 GO:0004672|GO:0006468
Phac4g02047 353 FunFam Wall-associated receptor kinase 3 116 332 - -
Phac4g02047 353 Gene3D Transferase(Phosphotransferase) domain 1 116 333 - -
Phac4g02047 353 PIRSF ILK 15 332 - -
Phac4g02047 353 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 29 323 IPR044652 GO:0004672
Phac4g02047 353 Gene3D Phosphorylase Kinase; domain 1 14 115 - -
Phac4g02047 353 SUPERFAMILY Protein kinase-like (PK-like) 18 313 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02047 Phac-Chr4 46970974 46975397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02047 24 317 Receptor kinase-like Gene Family AT1G25390 43.960 1.51e-71 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phac4g02047 PK_Tyr_Ser-Thr 1.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02047 - - var:108343962 602.823