Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02043 ATGAGATTTAGGTGTGATCTCTTTGAGTGCTGCTTCACTAGCACATCTTCTGACACATTTCCAAAGGACAGAAGCCTGAAGTGGCGAGTCTTTCCCTACAAGGAAATTGCAAAAGCCACAAATAATTTTGATCAATGTCACTGTCTTGAAAAGGGAGTAGGAAAGAAAGGCTTTATCGATCAGTACCACGGAACACTTGAGGATGGACGCGAGATTACAGTCCAGCGCTTTAAAGAAGACAAACGCTACATATTGCAACAGTTTATCAATGAAACTGTTATACTAAATTACTTACCCCACAAAAATATTGTGTCAATTTACGGGTGCACTTCTCATCATGAGGAACCTCTGCTAGTGCATGAACACCTATCCAATGGAAATCTTGATGCACATTTTGTAAGTGAAAAGGACGAAAACATTGCCCTACCTTGGCTTAAAAGATTAGATATAGCCGTTGATATTGCAAATGCATTGGACTATCTTCACTATTACGGCATCATCCACCGCAATGTGAAGTCCAGCAATATTCTCCTAGATGTGAACTTTTCTGCTAAGCTTGCTAACCTTCATTTATCATGCAAACTTCCAGATGGAGTTCCTGTTGACACCATTCATGTTACTAGTGATAGAGTAGGTTCAGGTGGTTATATAGATCCAGAGTATTTGACAAAAGGCCGGCTTAGTGTAAAAATTGATGTTTATAGTTTTGGAGTGGTGTTGTGTGAGCTTCTATCATCAAAGCTGGCAAAATACTGGATTCTCAACGAGGAGGATAATCTTGGTACCCTTTTAAGCAGAAAAATTGAAAACAAAACTTTGGTGGAGCTGTTTGATCCAAGACTTGGGTTCCAATCAAACCTTCATATCAAGCAGGTGATGACTGCTACAGCAGAGCTTGCAGTTCTCTGCATGAAATGTCCACAAGAATCGAGACCAAACATGGAACAGGTGATAGAGATTCTCAGTCTGATAAAGCAAGGGAGATATGGAACAAACTCTCACTCAACTAAATCTTTGAAAATCTTCCACCATGCTGAACTTGAAGAAGCTACCAACAATTTTGGCACTTGCCTTGGAAAGGGAGGGTATGGCAGCGTATACTATGGAAAACTTAAAGATGGGCTAGAGGTTGCAATAAAATGTTTCCATGACGAGAATGAGACAGAAGAGACCATTAAGCAATTCATGAAAGAATCTGAGATCTTAGGTCTCTTGAACCATCAAAATCTGGTCTCACTTTATGGCCGCACTTCTCGCCATCGCAAGAAACACATGCTAGTGTATGAGTATATCTCGAATGGCACTCTTTCAAGACATCTTCATGAGTCTTCCAGTGGTAAACTACCATGGCAAACTAGATTGAATATTGCCATTGAAACTGCAACTGCCTTAGATTTTCTTCATGACTCAAGTATCATCCACCGTGATGTGAAAGGGAGTAATATTCTGCTGGATGAAAATTTTACAGTTAAAGTTGCTGATTTTGGATTCTCACGGTCTCTTCCAGATCATGTTACTCATGTTACAACTATTCCAGTAGGAACTCGTGCTTACATAGATCCTGACTACTACATATCTGGAAGGGTCAGTAACAAAAGTGATGTCTATAGTTTTGGAGTGGTTTTGTTTGAACTCATATCATCTATCCACCCAAGTTTAGTTGCAGGCACAGATAATGAGACTCTTGCACAGTTTGCAAAGAGAAAAATCTTGAACAATGAATTAAATGAGATAGTTGATCCATACTTTTTGTGTGGTTCTGATGATAACACTTTGGAAATGGTAACAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAGGGAGTTCAGACCATCCATCAAACAGGTGCTAGAGACTCTGGAGGGTATAAGGAAAGGAAAATGGGGATTCAACCAGATAACATAG 1914 0.3997 MRFRCDLFECCFTSTSSDTFPKDRSLKWRVFPYKEIAKATNNFDQCHCLEKGVGKKGFIDQYHGTLEDGREITVQRFKEDKRYILQQFINETVILNYLPHKNIVSIYGCTSHHEEPLLVHEHLSNGNLDAHFVSEKDENIALPWLKRLDIAVDIANALDYLHYYGIIHRNVKSSNILLDVNFSAKLANLHLSCKLPDGVPVDTIHVTSDRVGSGGYIDPEYLTKGRLSVKIDVYSFGVVLCELLSSKLAKYWILNEEDNLGTLLSRKIENKTLVELFDPRLGFQSNLHIKQVMTATAELAVLCMKCPQESRPNMEQVIEILSLIKQGRYGTNSHSTKSLKIFHHAELEEATNNFGTCLGKGGYGSVYYGKLKDGLEVAIKCFHDENETEETIKQFMKESEILGLLNHQNLVSLYGRTSRHRKKHMLVYEYISNGTLSRHLHESSSGKLPWQTRLNIAIETATALDFLHDSSIIHRDVKGSNILLDENFTVKVADFGFSRSLPDHVTHVTTIPVGTRAYIDPDYYISGRVSNKSDVYSFGVVLFELISSIHPSLVAGTDNETLAQFAKRKILNNELNEIVDPYFLCGSDDNTLEMVTAVAELAFQCVQCPREFRPSIKQVLETLEGIRKGKWGFNQIT* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02043 637 ProSiteProfiles Protein kinase domain profile. 352 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02043 637 FunFam Wall-associated receptor kinase 3 431 636 - -
Phac4g02043 637 Gene3D Phosphorylase Kinase; domain 1 330 430 - -
Phac4g02043 637 ProSiteProfiles Protein kinase domain profile. 47 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02043 637 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 336 630 IPR044652 GO:0004672
Phac4g02043 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Phac4g02043 637 Gene3D Transferase(Phosphotransferase) domain 1 123 329 - -
Phac4g02043 637 Pfam Protein tyrosine and serine/threonine kinase 354 571 IPR001245 GO:0004672|GO:0006468
Phac4g02043 637 Pfam Protein tyrosine and serine/threonine kinase 62 321 IPR001245 GO:0004672|GO:0006468
Phac4g02043 637 SUPERFAMILY Protein kinase-like (PK-like) 330 627 IPR011009 -
Phac4g02043 637 SUPERFAMILY Protein kinase-like (PK-like) 23 325 IPR011009 -
Phac4g02043 637 SMART serkin_6 43 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02043 637 SMART serkin_6 352 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g02043 637 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Phac4g02043 637 Gene3D Phosphorylase Kinase; domain 1 18 122 - -
Phac4g02043 637 Gene3D Transferase(Phosphotransferase) domain 1 431 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02043 Phac-Chr4 46951348 46956196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02043 339 627 Receptor kinase-like Gene Family AT1G25390 50.508 4.80e-84 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phac4g02043 PK_Tyr_Ser-Thr 3.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02043 - - vra:106773095 1138.64