Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01999 ATGTCAGAACTCGATCTGTCCAAGAAAGTAGCCGATAGGTATCTCAAGCGTGAGGTCCTTGGTGAAGGTACATACGGTGTCGTTTACAAAGCCATCGATACGCAGACAGGGCAGACGGTGGCAATTAAGAAGATCCGGCTGGGCAAGCAGAAAGAAGGGGTCAATTTTACGGCTCTCAGAGAAATTAAACTGCTTAAGGAGCTCAAAGATCCAAACATTATTGAGCTGATTGATGCCTTTCCCCATAAAGGGAATTTACATCTTGTGTTTGCGTTCATGGAGACAGACCTTGAAGCTGTTATACGGGACCGGAATATTGTTCTTTCACCCGGTGATATAAAATCTTACCTTCAGATGACACTTAAAGGCCTTGCTGTTTGCCACAAGAAATGGGTGTTACATAGGGATATGAAGCCAAATAACTTGTTGATAGGATCTAACGGACATCTGAAACTTGCAGATTTTGGTTTAGCTCGGGTATTTGGAAGCCCAGACCGCAGGTTCACTCATCAGGTGTTTGCAAGGTGGTATAGAGCACCTGAACTATTATTTGGTACCAAGCAGTATGGTCCAGGGGTAGATGTTTGGGCTGCAGCCTGTATTTTTGCTGAACTTCTTCTTCGTCGACCCTTCCTGCAGGGTTCAAGTGATATTGATCAATTAGGAAAAATTTTCGCAGCATTTGGAACTCCATCTCCTTCTCAGTGGCCGGATATGATCTACCTACCTGATTATGTTGAATATCAACATGTTCTTTCTCCACCTTTGCGTTCTTTGTTTCCAATGGCAAGTGACGATGCTTTAGATTTGTTGTCAAAGATGTTTACTTATGATCCAAAAGCTAGAATTTCAGTGCAGCAGGCATTAGAGCACAGGTACTTCTCTTCTGCACCTCTGCCTACAGATCCTGTTAAACTTCCAAGACCTGCCCCTAAGAAGGAATCTAAGGCTTCAGATGTAATTACAAACGAAGGTCCTACTGTCTTGTCACCTCCAAGAAAGTCTAGGAGAGTAATGCCAGGGCGTGATGGGTCTGAAGGCAATTCCTTGCAAGGAGATAAGTTTGATGACAGTGTTAGTGTCAGACAGGCAGCTGGTGATAACACAGGCAAAAATGAGCCAGTTCCAATGTCACTAGATTTTTCTCTTTTTGGATTGAAACCTCCAAATAGACCTACAATTACCAGTGCTGACAGATCACATTTAAAAAGAAAATTAGATCTAGAATTTTAG 1233 0.4282 MSELDLSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDPNIIELIDAFPHKGNLHLVFAFMETDLEAVIRDRNIVLSPGDIKSYLQMTLKGLAVCHKKWVLHRDMKPNNLLIGSNGHLKLADFGLARVFGSPDRRFTHQVFARWYRAPELLFGTKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPSPSQWPDMIYLPDYVEYQHVLSPPLRSLFPMASDDALDLLSKMFTYDPKARISVQQALEHRYFSSAPLPTDPVKLPRPAPKKESKASDVITNEGPTVLSPPRKSRRVMPGRDGSEGNSLQGDKFDDSVSVRQAAGDNTGKNEPVPMSLDFSLFGLKPPNRPTITSADRSHLKRKLDLEF* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01999 410 MobiDBLite consensus disorder prediction 351 367 - -
Phac4g01999 410 ProSitePatterns Protein kinases ATP-binding region signature. 20 44 IPR017441 GO:0005524
Phac4g01999 410 PANTHER CELL DIVISION PROTEIN KINASE 12 300 - -
Phac4g01999 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Phac4g01999 410 Pfam Protein kinase domain 16 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01999 410 ProSiteProfiles Protein kinase domain profile. 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01999 410 SMART serkin_6 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac4g01999 410 Gene3D Transferase(Phosphotransferase) domain 1 95 310 - -
Phac4g01999 410 CDD STKc_CDK7 13 307 IPR037770 GO:0005675|GO:0008353|GO:0070985
Phac4g01999 410 Gene3D Phosphorylase Kinase; domain 1 4 94 - -
Phac4g01999 410 MobiDBLite consensus disorder prediction 300 410 - -
Phac4g01999 410 FunFam Putative cyclin-dependent kinase 7 95 310 - -
Phac4g01999 410 SUPERFAMILY Protein kinase-like (PK-like) 9 301 IPR011009 -
Phac4g01999 410 FunFam Cyclin-dependent kinase D-1 5 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01999 Phac-Chr4 46637307 46642095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01999 8 410 Core Cell Cycle Gene Families AT1G73690 76.238 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK7 Phac4g01999 Pkinase 8.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01999 K02202 - gmx:100814263 796.193