Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01995 ATGACTCCTCGCGTCGGCGATTTCGAAAACGACAATCTGTCCTCCACCGACGACGATGACGACGACGGCTTCAAGGAAGATATGGCCGCGCTCTCCCGAGCCTGCATGATCGTTGTCCCAGGCGCCGATGATTATTCCGCAGCTGAAGACGATGTTCCGCCGATGGTCCCTCTCACTGATGACGCCGGCACTGCTATTGTTCCCGTGGCCACCGATTCCGACTCCGACGACCAGGACGACCTCGAATGTCTCAAGAGAGTGCAGAGCCTTTACCAGCCTCTGTCCGTTCTTCCGCCGCTTGAGCCGGCGGTGGCCGTGTCTGACGATGACGATGACGTGGATGATCTCGAGACCGTGCGCGCCATCATGAAAAGGTTTGGCGACTACAACGAAGGTTTGCATGAAGGTGGAATAAATAAGTTGGTTGAGGAGGATCAGATTTCCAGCCTGGGCTGTGAGGGTGACATTGCTAATGGCTCAATCCATTACGAATCAGATGGTGGTGAATTATGTCCTATTTCTCAAGATCCTAACGAGGCTGCCACAGAGGAATTGATTGAAAACATTGAGATGCAGCTTAGTGATTTTGTTGAGAGTTCTGAACCGGATGCCTGGGAGTTGACCACATTACCACAGAAAAAAATGAGCTGTCCTCCTGTTGTTCAGTGTTTTATTGATGCCATTAAAAAAAATAGGGATTTGCAGAGATTTCTTAGAGGCAAATTGATTGAGCTTGAGGCTAAAATTGAGGAAAGCAAAAAGATAAGGAATAAAATTAAAATTCTGAAGGACTTCCAGGCTTCCTGCACTAGAAGAACAGGGAATATATTATCACTGAAAAAAGATCCACGTGTTCAATTAATATCTGCAAAAAGGTCTTCTGCTCGGAAGAAGTCTAAGAAACATAAAAAGGTACCTGCAATGTGTTATGGCCCAGAAGAAAATTCTCGTGTTGCTAACTATAGGATGGTATTGGAAAGATTTCCACTTTCGTTGGATCGGAAAAAATGGTCTATGGTAGACAGGGGAAATCTTTTTAAGGGAATTAAGCAACAATTCCAAGAAATGGTACTTCAACTTTCACTTTCACTTGATAGAACAAGTTCTGAGGGCTTGCTTGGAGATGCTGATGACATGGATAATATAATTGCATCTGTTAAAGATCTTGAAGTCACACCAGAGAGGATTAGAAAATTTTTGCCTAAAGTTAATTGGGATCTGATGGCTTCTATATATGTTGGTGGCCATACTGGTGCTGAATGTGAATCAAGGTGGTTGAATTATGAAGATCCTTTGATCAACCAAGGTGCATGGACTAAGGAAGAGGACAGGTCCCTTTTACTTATTGTCCAAGATATGGGCATCAGGAACTGGTTCAATATTGCTTCATCATTGGGCACAAGCAGGACTCCATTTCAATGTTTGTCACGATTCCAAAGGAGTTTAAATCCTTCAATGCTAAATAGTGAATGGACTGAGGAAGAGGATGCTCAACTATGTTCTGCTGTGACATATTTTGGTGATGGCAATTGGCAGTGTGTGGCTTCTGTTTTAGAACGGCGAACAGGAACCCAGTGCTCAAATAGATGGAAGAAATCCCTTTGTCCTGAGAAGAAAGGGAGCTTTACACCAGAGGAAGATATACGCTTAACAGTAGCTGCTATGCTTTTTGGGCGGAAATGGAATCAAATAGCTAAATATGTTCCTGGCCGGATCCAATCTCAGTGTAGGGACAGATACCTCAATAGTCTGGATCCTTCTTTGAAATGGGGTGGATGGACTGAGAAAGAGGATTTAAGATTAGAAGCTGCAATTGCCAAGCATGGATATTGTTGGTCTAAGATTGCTGAAGAAGTGCCTCCCCGAACGGATTCTCAATGCCGAAAGAGATGGAAAGTGTTATACCCTGAACAAGTTCCTTTGCTTCAAGAAGCAAGAAAGAAGCAAAGGGCTATTATTGGTGGTAACTTTGTTGATCGAAAATCTGAACGTCCAACCATTACACTTAATGACTTTCTACCTTTACTTGCATTAGCTCCAAAATCTGATGTTGGTGCTTCAGACATCTGCAAGAAGCGCAAGACCAGCAATGTTCCCAAGAAAACGAGCTCTAAGAAAGGTGCAAAGAGAACTCAACGTACCAAAGAAGTACGAGATACAGAGGTATATCATGATGATGAGCTCTACCCAGTCTCTACATGCAGCAATCTTCCCAAAAAGAAGATGGGGTCCAAAAGACGTATAAAAAGTAGTCGAAATCCTCCCCAAGAATTAGTGGATATCTCTTGTAGTGACAAGGTCACTTACATTGAGGGTTCAGAAAACCAATCTACCTATATTCCGAATTCTGAAAATCAAGATTCAGACAACATACCCCTTGCATGTTTTTTACGCAAGAAATCAAATGAGATATTATCTAGATTTAACAAAAAATTAAGTCAAACTTCCTTCTCTAGGATTACTGATGTTCCTGAGCAGGTTGAAAGTCAAAGCGCATCTGATGATCAAGGCGGCTTGCCTCATTCTTGTGAAACTGTTGGAACTAAAAAATTGCTTGTGCAGCCGAATGTTGCTTCTGATAGACGAGTGAGAAGCCAAGAGGATACAAATACTTTGACATGTGATGATGACGACGATGACCATATGACCCTTGCATGCTTTCTAAAAAACAAGCCAAAGAAAGAGGTCAACCTGCTAAAGGACATGGTGTGTGCTCTTCCAAATTAA 2727 0.4279 MTPRVGDFENDNLSSTDDDDDDGFKEDMAALSRACMIVVPGADDYSAAEDDVPPMVPLTDDAGTAIVPVATDSDSDDQDDLECLKRVQSLYQPLSVLPPLEPAVAVSDDDDDVDDLETVRAIMKRFGDYNEGLHEGGINKLVEEDQISSLGCEGDIANGSIHYESDGGELCPISQDPNEAATEELIENIEMQLSDFVESSEPDAWELTTLPQKKMSCPPVVQCFIDAIKKNRDLQRFLRGKLIELEAKIEESKKIRNKIKILKDFQASCTRRTGNILSLKKDPRVQLISAKRSSARKKSKKHKKVPAMCYGPEENSRVANYRMVLERFPLSLDRKKWSMVDRGNLFKGIKQQFQEMVLQLSLSLDRTSSEGLLGDADDMDNIIASVKDLEVTPERIRKFLPKVNWDLMASIYVGGHTGAECESRWLNYEDPLINQGAWTKEEDRSLLLIVQDMGIRNWFNIASSLGTSRTPFQCLSRFQRSLNPSMLNSEWTEEEDAQLCSAVTYFGDGNWQCVASVLERRTGTQCSNRWKKSLCPEKKGSFTPEEDIRLTVAAMLFGRKWNQIAKYVPGRIQSQCRDRYLNSLDPSLKWGGWTEKEDLRLEAAIAKHGYCWSKIAEEVPPRTDSQCRKRWKVLYPEQVPLLQEARKKQRAIIGGNFVDRKSERPTITLNDFLPLLALAPKSDVGASDICKKRKTSNVPKKTSSKKGAKRTQRTKEVRDTEVYHDDELYPVSTCSNLPKKKMGSKRRIKSSRNPPQELVDISCSDKVTYIEGSENQSTYIPNSENQDSDNIPLACFLRKKSNEILSRFNKKLSQTSFSRITDVPEQVESQSASDDQGGLPHSCETVGTKKLLVQPNVASDRRVRSQEDTNTLTCDDDDDDHMTLACFLKNKPKKEVNLLKDMVCALPN* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01995 908 CDD SANT 593 634 IPR001005 -
Phac4g01995 908 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 585 639 IPR017930 -
Phac4g01995 908 Pfam Myb-like DNA-binding domain 539 582 IPR001005 -
Phac4g01995 908 Pfam Myb-like DNA-binding domain 592 633 IPR001005 -
Phac4g01995 908 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 539 584 IPR017930 -
Phac4g01995 908 CDD SANT 541 584 IPR001005 -
Phac4g01995 908 CDD SANT 490 534 IPR001005 -
Phac4g01995 908 SUPERFAMILY Homeodomain-like 412 479 IPR009057 -
Phac4g01995 908 Pfam Myb-like DNA-binding domain 438 499 - -
Phac4g01995 908 MobiDBLite consensus disorder prediction 738 757 - -
Phac4g01995 908 CDD SANT 437 482 IPR001005 -
Phac4g01995 908 Gene3D - 538 590 - -
Phac4g01995 908 ProSiteProfiles Myb-like domain profile. 538 584 IPR001005 -
Phac4g01995 908 Gene3D - 489 537 - -
Phac4g01995 908 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 430 482 IPR017930 -
Phac4g01995 908 ProSiteProfiles Myb-like domain profile. 585 635 IPR001005 -
Phac4g01995 908 Gene3D - 592 638 - -
Phac4g01995 908 MobiDBLite consensus disorder prediction 690 717 - -
Phac4g01995 908 SUPERFAMILY Homeodomain-like 486 580 IPR009057 -
Phac4g01995 908 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 15 836 - -
Phac4g01995 908 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 483 538 IPR017930 -
Phac4g01995 908 SUPERFAMILY Homeodomain-like 564 636 IPR009057 -
Phac4g01995 908 ProSiteProfiles Myb-like domain profile. 430 482 IPR001005 -
Phac4g01995 908 Gene3D - 432 482 - -
Phac4g01995 908 ProSiteProfiles Myb-like domain profile. 483 534 IPR001005 -
Phac4g01995 908 SMART sant 487 536 IPR001005 -
Phac4g01995 908 SMART sant 434 484 IPR001005 -
Phac4g01995 908 SMART sant 333 431 IPR001005 -
Phac4g01995 908 SMART sant 589 637 IPR001005 -
Phac4g01995 908 SMART sant 538 586 IPR001005 -
Phac4g01995 908 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01995 Phac-Chr4 46594911 46604126 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g01995 210 686 MYB-Related Transcription Factor Family AT3G18100 50.816 2.27e-166 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac4g01995 Myb_DNA-bind_6 2.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01995 K09422 - gmx:778073 1318.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac4g01995 4 46594911 46604126 Phac4g01995 4 46594911 46604126 ECH